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… benefits to address climate change: pulling atmospheric carbon into soil and boosting biofuel feedstocks with less fertilizer. For millions of years, underground fungi have lived in symbiosis with … JGI postdoctoral scholar Margot Bezrutczyk collaborated extensively with Cole and Serrano to collect and analyze the …

… Nanohaloarchaeota cultures reveal they are symbionts and not free-living organisms. The Science Researchers … in understanding the genomic basis and ecological consequences of microbe-microbe interactions. Using metagenomes … native microbes. Metagenomes from enrichment cultures were sequenced and assembled by the JGI. From these assemblies, …

… projects. Through the Facilities Integrating Collaborations for User Science (FICUS) program, two Department of Energy (DOE) Office of Science national user facilities—the  Environmental Molecular Sciences … of drought on plant metabolism and particularly, what happens in the rhizosphere where plants, microbes and soil …

… In honor of the JGI's 25th anniversary in 2022, we have … number of notable achievements that showcase our collaborations and capabilities to enable great science that will help … cell (seen here in a glass capillary), researchers sequenced and assembled the first complete genome of an …

… Congratulations to the 2023 Highly Cited Researchers from the JGI … in their chosen field or fields through the publication of multiple highly cited papers during the last decade” … elements based upon their gene content and their genetic sequences. Roux was first author on a study featuring a new …

… Select interns look back on meaningful lessons from their summer experiences at the JGI Berkeley Lab … that I already have and with this sort of data science lens. It turns out like a lot of fields would like to have …

… and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. They can be found … called geNomad identifies and classifies MGEs based upon their gene content and their genetic sequences. The software was created by researchers under the …

… marine heatwave event may foreshadow climate change impact on marine microbial communities. The Science A team of … on how climate change may impact marine microbes and by extension, the ocean’s capacity to act as a carbon sink. … samples. Genomic DNA extracted from the water samples were sequenced by the U.S. Department of Energy (DOE) Joint …

… habitat. The Science By comparing genetic information from similar organisms, researchers have gained insights … lacrymans – var. lacrymans from Europe and var. shastensis from North America – against a third fungal Serpula species, S. himantioides from Europe, that was sequenced and analyzed by the JGI. The researchers found …

… A fungus relies on bacteria to regulate key components of its reproductive machinery The Science To better … with the fungi and bacteria, while the DOE JGI team sequenced and annotated a host genome (Rm ATCC 52813) as … This research was supported by the National Science Foundation and the National Institutes of …

… In honor of the JGI's 25th anniversary in 2022, we have … Microbial Genomics & Microbiomes (IMG/M) system’s immense collection of publicly accessible metagenomic datasets … CA. Banfield’s observations of the CRISPRs in her microbial sequences piqued Doudna’s interest. As Doudna noted in her …

… Analysis of haloarchaeal metagenomes broadens understanding of Antarctic biogeography. The Science Haloarchaea flourish in hypersaline environments, and researchers are interested in learning how … Impact By collecting and sequencing dominant haloarchaeal sequences from six hypersaline lakes, researchers focused on …