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Cultivating Symbiotic Antarctic Microbes
… Nanohaloarchaeota cultures reveal they are symbionts and not free-living organisms. The Science Researchers … biosphere), including the global carbon cycle. The JGI is sequencing large numbers of microbes and microbial … This work was supported by the Australian Research Council (DP150100244) and the Australian …
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… This single environmental trigger highlights efficiency for users … its energy, building blocks and regulatory machinery toward chemical production — a coordinated response that had … salt triggers this metabolic shift, the team combined RNA sequencing across multiple time points with Cappable-seq, a …
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Mining Metagenomes for Cas Proteins
… Cas14 proteins discovered from JGI’s IMG/M database and biochemically characterized at UC Berkeley and the … the untapped potential waiting to be unearthed in sequencing and analyzing uncultivated microbes. Summary The … The work conducted by the US Department of Energy Joint Genome …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… Over 40 percent of the cereal crop’s genes respond to drought stress. The Science Fields of … nearly 400 root and leaf samples and helped analyze the sequencing datasets. The results from the first year showed … This research was funded in part by DOE Grant DE-SC0014081 (to N.V., B.C., C.G., …
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The JGI Data Portal: Improving User Experience
… The human-centered, agile collaboration between the JGI and the information technology company Truss has … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… For the first time in several years, the DOE Joint Genome Institute hosted … reported were incredibly valuable to their careers going forward. Watch this short video (below) to hear more about the … And we’ve been working on isolating and cultivating and sequencing extremophile protists from a hypersaline alkaline …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… A two-day kick-off meeting held at Lawrence Berkeley National Laboratory (Berkeley Lab) marked the … impactful papers in recent years, but are also looking forward to jointly expanding into new areas of research. The … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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FICUS Webinar: “Shining a Light: Advanced Photon Source Capabilities for FICUS Research”
… On February 8, 2024, the DOE Joint Genome Institute and the Environmental Molecular Sciences Laboratory … Q(uestion) 1: Can researchers perform suggested treatments in the … What are the acceptable budget categories for the FICUS awards? A: You don’t put a budget together. You request …
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Waiting to Respire
… Genomes from uncultivated bacteria offers clues to ancestral bacteria’s energy sources. More than two billion years ago, … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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A User-Centered Approach to Accessing JGI Data
… When the JGI Data Portal (https://data.jgi.doe.gov/) launched last year, it was only accessible through the plant portal  Phytozome . Now the … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Pinning Down a Piece of Photosynthesis
… By studying the structure and function of a cyanobacterial protein, researchers have … domain, looking for context clues that might point them toward the domain’s function. They found many instances of … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… Trained on environmental data, a new JGI tool more accurately facilitates … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science … (BER) missions. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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