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JGI Welcomes New UEC Members
… providing input and advice on JGI policies and practices that affect users and their access to technical capabilities JGI offers, as well as proposal review procedures and the organization of the JGI Annual Meeting. Any investigator who has been an …
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The Case for Conservation
… genome . Now, high-quality reference genome sequences of the male and female plants, each representing a single set of chromosomes, are available. The genome assemblies … metabolic pathways could lead to the discovery of genes that could be used for multiple biotechnological …
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The fungus that made itself at home
… plant mass for conversion to sustainable, alternative biofuels and bioproducts. This study lends insights on how the … 5, 2018 in The ISME Journal , a team led by University of Oslo scientists and including researchers at the Joint … third fungal Serpula species, S. himantioides from Europe, that was sequenced and analyzed by the JGI. The researchers …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… A nuanced understanding of peat moss drives insight into carbon storage   The Science Boggy peatlands, which hold much of the Earth’s carbon as well as material that can be converted to energy, are made up heavily of … (A.J.S.) conducted by the US Department of Energy (DOE) Joint Genome Institute ( …
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UC Merced Interns Reflect on Their JGI Summer Projects
… Over the course of eight weeks this past summer, 10 students from UC Merced … worked closely with JGI scientists on research projects that contribute to the larger mission of the U.S. Department of Energy. Students also worked with …
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Toasting to the 2020 JGI-UC Merced Summer Internship Program
… UC Merced students and their JGI mentors toasted to the end of a nine-week virtual internship. The celebration was … JGI staff. According to Axel Visel and Zhong Wang, founders of this internship program, this was the largest turnout for … JGI mentor. Together, they work through a specific project that aligns with each intern’s interests or educational …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
… just one research proposal. Guest speaker Michelle O’Malley of UC Santa Barbara talked about how her approved FICUS … Collaborations for User Science” (FICUS) program. Letters of Intent are due March 17, 2021. Q&A from the Webinar: … Q: In her presentation, Michelle O’Malley said that having constant conversations helped with the proposal …
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A Model System for Perennial Grasses
… Panicum hallii genomes offer insights to drought tolerance. The Science Researchers … by generating two complete genomes from varieties that diverged over a million years ago. The hallii variety … feedstock with a complex genome with multiple copies of its chromosomes. Switchgrass has deep roots that allow it …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable …
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Busting the Unbreakable Lignin
… New evidence shows anaerobic fungi can degrade the hardiest of plant components   The Science There are three main … called lignocellulose, are the primary components of hardy cell walls. It’s the cellulose and hemicellulose that eventually yield fuels, and removing lignin in order to …
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Benjamin Cole
… University of California, San Diego (PhD, 2011) Rensselaer Polytechnic … List of pubs available on NCBI … Implementation of the Index of Cell Identity as an R package … Selected Publications … Software …
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Jeremy Schmutz
… the pipelines for directed finishing and co-led the team that finished the DOE human chromosomes 5, 16, and 19. Following the completion of the Human Genome Project in 2003, he developed … assembly, and improvement strategies for de novo sequencing of eukaryotic organisms from simple yeasts to large …
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