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Partnerships: Myco-Ed
… The Mycological Curriculum for Education and Discovery  (Myco-Ed) is a Course-Based … selected for sequencing 16 genomes released 20 members from 15 institutions 300+ students 800+ iNaturalist … sequencing and tissue preparation), allowing participation from a growing audience. For consistency and to reduce …
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JGI Advisory Committee
… The JGI Advisory Committee (JAC) is convened by the JGI Director to … external advisory body, the JAC includes representatives from all specialized JGI advisory and executive committees, … Advisory Committee, the Informatics Advisory Committee, the Plant Program User Advisory Committee, the Prokaryote …
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Meeting Code of Conduct
… All participants and staff of JGI events are required to … policy. Our aim in hosting an event is to build a stronger community. Our goal is to create an environment where … Participants violating these rules may be expelled from the event at the discretion of the event staff. …
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Uncovering Novel Genomes from Earth’s Microbiomes
… have uncovered genomes for just a small fraction of Earth’s microbial diversity. Because most microbes cannot be … under laboratory conditions, their genomes can’t be sequenced using traditional approaches. Identifying and … environmental samples  sequenced by the JGI through the  Community Science Program and was already available on the …
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Taking Stock of the Known and Unknown Microbial Space
… Metagenomic datasets could help map out microbial diversity hotspots Over the past few decades, … microbial genomes becoming available to the global research community.  Published January 17, 2025 in Science Advances , … genomic biodiversity. Using publicly available genome sequence data generated over the past three decades, their …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… Proposals aim to sequence and annotate genomes from Antarctica to Africa to global oceans. Through the Community Science Program of the U.S. Department of Energy … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… Analysis reveals the microbial community involved in a bioremediation effort. The Science … and 2010. DNA was extracted from the samples that were sequenced by the U.S. Department of Energy (DOE) Joint … of General Medical Sciences (NIGMS) (8 P20 GM103451-12) from the National Institutes of Health (NIH).  …
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DAS Tool for Genome Reconstruction from Metagenomes
… and improved upon a tool that combines existing DNA sequence binning algorithms, allowing them to reconstruct … how individual microbes interact with each other in a community, and characterizing their individual … genomes, particularly from incredibly complex soil microbial communities, is crucial to understanding how these …
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Forming Scientific Connections and Building Community
… The 11th cohort of JGI-UC Merced interns pick highlights from their summer experiences. This year the U.S. Department … : “The best part of the internship is the welcome and open community of the JGI. Everyone is excited to learn and share … W. Berkeley Kauffman Project: “ 16s Sequencing of Barcoded Microbial Genomes ” Morgan Lavenstein Bendall : “It’s great …
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Approved Proposals
… Click the cards below to view a downloadable pdf of accepted proposals from previous fiscal years for our Community Science Program (CSP) as well as the Facilities …
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Synthetic Biology Informatics Group
… Software engineers in the Synthetic Biology Informatics Group develop, deploy, and maintain software that … tool BOOST , which provides a suite of tools to automate sequence design for assembly by Gibson, Yeast recombination … For further details, please reach out to the Group Lead …
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Next generation sequencing data of a defined microbial mock community
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