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Game On: High School Students Drive Everglades Metagenomics Study
In late June, Kathleen Lail, a member of JGI’s Sample Management Group, attended a conference in … DNeasy PowerSoil Kits and sent the samples to the JGI for sequencing.  While JGI processed, sequenced, and analyzed … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …
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Disclaimer
NOTICE Information from this server resides on a computer system funded by the U.S. Department of Energy. Anyone using this system consents to monitoring of this use by system or security personnel. … With respect …
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User Programs
For accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user … with DOE mission-relevant projects that call for expansive sequencing, synthetic biology and metabolomics capabilities …
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Genomes of Three Methylotrophs from a Single Niche Reveal the Genetic and Metabolic Divergence of the Methylophilaceae
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MetaBAT, an efficient tool for accurately reconstructing single genomes from complex microbial communities
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the watersheds … over 1,000 metagenomes and established standardized sequencing protocols so that researchers could compare …
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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy and … tools, allows  Miscanthus to both inform and benefit from breeding programs of related candidate bioenergy … Understanding the evolution of polyploidy, and how genomes respond to extra chromosome and gene copies, will …
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Help from Citrus’ Bitter, Hardier Cousin
The chromosome-scale genome sequence of trifoliate orange yields clues to disease-resistance that could prove fruitful for saving Citrus from greening disease. You’ve probably never heard of … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Seven genome sequences of bacterial, environmental isolates from Pony Lake, Antarctica.
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Eight genome sequences of bacterial, environmental isolates from Canada Glacier, Antarctica
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… ice in the Arctic has decreased by more than 30% in terms of quantity and thickness. Replacing older, thicker ice with … Biology article highlights how one microalga collected from water on the ice surface handles such fluctuations. P. … This was facilitated in part by RNA library preparation and sequencing from the U.S. Department of Energy (DOE) Joint …
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Cultivating Symbiotic Antarctic Microbes
The Impact The Antarctic lakes are a “treasure trove” of unknown microbes that play critical roles in … biosphere), including the global carbon cycle. The JGI is sequencing large numbers of microbes and microbial … consequences of microbe-microbe interactions. Using metagenomes recovered directly from environmental samples and …
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