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Genome Sequence of Thermotoga sp. Strain RQ2, a Hyperthermophilic Bacterium Isolated from a Geothermally Heated Region of the Seafloor near Ribeira Quente, the Azores
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Project Management Office
Planning Manager Miranda Harmon-Smith DNA Synthesis and Single-Cell Genomics Vivian Ng Fungal Genomics …
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Fungal Friends or Foes in Plant Roots
… plant host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with genomes from other plant-associated fungi. Their analysis identified … the collection. The team then compared this dataset against nearly 80 previously published fungal genomes on the JGI …
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Metabolomics
JGI Metabolomics Platform delivers rich metabolite profiles from diverse biological and environmental samples using … molecular profiles are generated for metabolites extracted from a variety of experimental samples, including organisms … more about our submission guidelines, what you can expect from your results as well as our library standards. … …
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Glacier ice archives nearly 15,000-year-old microbes and phages
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Uncovering Novel Genomes from Earth’s Microbiomes
… methods in the past decade, researchers have uncovered genomes for just a small fraction of Earth’s microbial … repository of 52,515 microbial draft genomes generated from environmental samples around the world, expanding the … BGCs in  IMG/ABC (Atlas of Biosynthetic Gene Clusters) by 31%. ( Listen to this JGI Natural Prodcast episode on genome …
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Stimulation of dissimilatory sulfate reduction in response to sulfate in microcosm incubations from two contrasting temperate peatlands near Ithaca, NY, USA.
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Cell Extracts from Bacteria and Yeast Retain Metabolic Activity after Extended Storage and Repeated Thawing
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A Plant Root Atlas for Tracking Developmental Trajectories
… expression patterns in the  Arabidopsis root, profiling nearly 100,000 single root cells and combining the information with … with resulting reports and a  perspective article . Publication: Shahan R et al.  A single cell Arabidopsis root …
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Cultivating Symbiotic Antarctic Microbes
… consequences of microbe-microbe interactions. Using metagenomes recovered directly from environmental samples and … sequenced and assembled by the JGI. From these assemblies, complete or near-complete population genomes were recovered—termed …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… host metabolism, such as genes that play roles in the uptake and transport of diverse substrates, and also … and giant viruses to any known virus lineage. “Getting complete, near complete, or partial giant virus genomes reconstructed …
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Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea
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