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Assembly of 500,000 inter-specific catfish expressed sequence tags and large scale gene-associated marker development for whole genome association studies
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DOE Metrics
FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal …     2,140     Q4 2025 175     2,167     *Includes Illumina and PacBio sequencing platforms. **Operating Hours target is … data. [Download PDF] Q4 – Report on a new computational method for improving the interpretation of microbial, …
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Frequently Asked Questions: Project Management
Eukaryotic projects: Kerrie Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del Rio , … JGI’s calls for proposals , and submit your proposal online using the Work Initiation Process (WIP) interface.    For … for individuals associated with your proposal. Find our Publications Policy on our Data Policy & Support page.    … …
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High‐Throughput In Vitro Glycoside Hydrolase (HIGH) Screening for Enzyme Discovery
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MaxBin: an automated binning method to recover individual genomes from metagenomes using an expectation-maximization algorithm
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Jane Grimwood Named HudsonAlpha Genomics Chair
… was named a Yellowhammer Woman of Impact.     Notable large-scale multi-institutional JGI projects and resulting publications that Grimwood contributed to include: A 2021 … ago.   As well as the seminal Human Genome Project DOE Chromosome publications: The DNA sequence and biology of …
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Spatial, Temporal, and Phylogenetic Scales of Microbial Ecology
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Natural Prodcast Episode 2: The Primer, Part 2
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … those those guys that move around or swarm – they might be using secondary metabolites to produce chemicals that would …
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A Community Resource for Secondary Metabolite Researchers
… more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence … public repository of BGC sequences that come pre-annotated using multiple commonly used sequence analysis tools is a … the most comprehensive BGC database available at 10X the scale of the closest comparable database, and has the …
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Engineering a new-to-nature cascade for phosphate-dependent formate to formaldehyde conversion in vitro and in vivo
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Tour the IGB
Take a virtual tour of the IGB, home of the DOE Joint Genome Institute. To navigate virtual tours of each floor, click and drag to look around the space, use the graphic rings to … the frontiers of environmental and energy genomics.  For more information about the science depicted, click here …
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Pinning Down a Piece of Photosynthesis
By studying the structure and function of a cyanobacterial protein, … produced, to identify examples that would work well for  in vitro  and  in vivo experiments.  In a project led by Blaby, …
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