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Plant Microbial Interactions Group
… Plants are complex organisms that harbor a fantastic diversity of … pathogens, and associated viruses that all contribute to a dynamic ecosystem. We are interested in how plants … by microbial partners. We use a variety of genomics-powered tools to study this complexity, including single-cell and …
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A Sorghum Pangenome Opens More Doors to Discovery
… Leveraging decades of technological development, dozens of … Flagship Plants , on the short list of plant genomes deemed most important to DOE mission and plant science. The work … Development (USAID) also supported the work.   Publication:  Morris, G.P., Harder, A.M., Healey, A.L.  et …
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Partnerships: Myco-Ed
… The Mycological Curriculum for Education and Discovery  (Myco-Ed) is a Course-Based … fungal biology teaching labs. The purpose of the program is to: train students and professors in laboratory techniques … Beyond providing a scalable solution for production of high-quality fungal …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the … the many obscure fungi of Chytridiomycota (the “chytrids”). Most of the attention on Olpidium was from agricultural … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of …
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2025 NeLLi Symposium
…   Registration has closed   Registration fees: Regular attendees  … Institute, the 2025 NeLLi Symposium delves into the most recent expansions of the Tree of Life and latest … progress in AI/ML that will enable researchers to discover novel lineages of life and move from the identification of …
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Sequencing Submission Requirements for DNA Synthesis
… When submitting sequences to the JGI DNA Synthesis program, please include the following items: … Sequence files for all constructs should be emailed to  Miranda Harmon-Smith, Synthetic Biology Project Manager . … How To Create an Annotated GenBank File There are several easy-to-use …
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Webinars on Offerings & Capabilities
… Below are a list of webinars that can help you through the submission process by … here . You can find additional webinars covering how to use our data portals here.  …
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Toward a Standards-Compliant Genomic and Metagenomic Publication Record
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A roadmap for equitable reuse of public microbiome data
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Waiting to Respire
… Genomes from uncultivated bacteria offers clues to ancestral bacteria’s energy … forces and data sets to describe bacterial genomes for related (“sibling”) lineages Margulisbacteria and … (MAGs) dubbed Margulisbacteria, and had found they were closely related to another group of MAGs later dubbed …
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Transfer RNAs with novel cloverleaf structures
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Novel approaches in function-driven single-cell genomics
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