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Partnerships: Adopt-A-Genome
… opportunity, provided by the Joint Genome Institute, builds upon thousands of microbial genomes that have been sequenced by the JGI though not formally analyzed or … adoption of classroom modules Currently 206 genomes have been selected with 11 published manuscripts published …
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Single Cell Research Group
… and uncultivated Bacteria and Archaea has steadily been widening since 2005. This gap is also reflected in the … the bulk of which belong to only three phyla. The Woyke group uses single-cell sequencing as a means to begin filling … For further details, please reach out to the Group Lead …
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Janey Lee
… Janey provides support for custom single-cell user projects and projects within the group. …
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Expanding Virophage Diversity
… wastewater, and even animal and human (for the first time) gut and taxonomically classified into 27 distinct clades (17 … Kb. Additionally, the gene counts have similarly gone up from 13-25 to 12-39. “Overall,” the team concluded, “we … Research Scientific Computing Center (NERSC) , which is supported by the Office of Science of the U.S. Department of …
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Project Management Office
… Kerrie Barry Plant and Algal Genomics Natasha Brown Supply Chain Manager Tijana Glavina del Rio Metagenomics     …
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JGIota: Looking Back at Methane-Making Microbes
… gas: methane. Those emissions mainly come from gut microbes — the bacteria and archaea breaking down plant matter. So since 2010, the JGI has supported researchers studying those microbial …
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Frequently Asked Questions: Project Management
… the “ edit contacts ” page in your account. Use the form to update all information except email address. To update your email address, click the “Request email change” … the past.  These protocols are not endorsed by and have not been validated by the JGI, but are provided as general …
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Micro-Scale Applications Group
… The Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also seeks out new approaches that utilize … For further details, please reach out to the Group Lead …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… interactions to untangle. Fungi work in cooperation to support a forest, and species vary across Earth’s … understanding of multiple forest systems, this work sets up protocols and pipelines that other teams can use around … Saprotrophs and mycorrhizal symbionts have historically been divided into separate ecological niches — recyclers and …
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Virus Discoveries that Keep Getting Bigger
… diversity, and how sequencing and bioinformatics have sped up the study of giant viruses. The Impact In their existence … sift for snippets of giant viruses in metagenomes. This has been useful in marine environments, where it has become … genomes through metagenomic binning. So far, this has been the most productive approach for giant virus genomic …
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Examples: Successful LOIs & Submissions
… Collaborations for User Science calls. These documents have been shared with permission from the PIs who drafted them.  …
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Homepage
… All the sampling activities in Antarctica have been performed in the frame of italian expeditions of the …
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