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Building Sphagnum Genomic Resources
… a number of resources to build up Sphagnum as a plant model system focused on carbon cycling studies, rather than for food or fuel applications. The Impact Sphagnum’s impact … Department of Energy under Contract No. DE-AC02-05CH11231. For the sphagnome project, germplasm establishment and …
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How Filamentous Fungi Sense Food
… Tracing gene regulatory networks in the model fungus  Neurospora crassa . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to reconstruct and model gene regulatory pathways used by the filamentous … generated by Grant P01 GM-068087 “Functional Analysis of a Model Filamentous Fungus” and that are publicly available at …
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PR-PR: Cross-Platform Laboratory Automation System
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Reference genome sequence of the model plant Setaria
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Genome sequence of the model rice variety KitaakeX
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Genome sequence of the model mushroom Schizophyllum commune
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Proteomics for Validation of Automated Gene Model Predictions
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Natural Prodcast
… JGI acts on its goals in — and builds out its capabilities for — secondary metabolism research, “Natural Prodcast” …
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Development of an integrated transcript sequence database and a gene expression atlas for gene discovery and analysis in switchgrass (Panicum virgatum L.)
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Protocols
… protocols provided by JGI and the JGI user community below for DNA preparation tools, high molecular-weight DNA … Tips for High Molecular Weight DNA extraction: …
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FICUS
… The Facilities Integrating Collaborations for User Science (FICUS) call represents a unique opportunity for researchers to request the capabilities and expertise of … or be otherwise mission-aligned, but proof of concept for the demonstration of a technology that would be …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… plant species have adapted to their local environments; for example, crop and ornamental seeds sold for the upper … copies across the chromosomes. “In the past, we needed model systems to test genetic hypotheses in species with large and … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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