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Publication Policy
… assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators and JGI … be found at the top of the proposal info page on the JGI Genome Portal. You can navigate to the proposal info page … for your proposal using your proposal's WIP ID (ex. 503582). Click on the correct proposal name on your search …
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Igor Grigoriev
Dr. Grigoriev joined the DOE Joint Genome Institute in 2003, following his postdoctoral … over 2500 fungal genomes in the JGI MycoCosm portal. In 2018, he launched scale-up of algal genomics and PhycoCosm … life.  Nature Microbiol. 3(12):1417-1428. Haitjema et al (2017) A parts list for fungal cellulosomes revealed by …
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JGI@25: The Little Alga That Could
… of those shared by both humans and flowering plants). Its genome also contains hundreds of genes uniquely associated … (Hear more from on Chlamy from Sabeeha Merchant in this episode of JGIotas, a Genome Insider podcast minisode.) Since the JGI’s early sequencing …
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Nikos Kyrpides
Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program … dark matter through global metagenomics. Nature . 622(7983):594-602. Camargo AP. et al. (2023) Identification of … Doctorate from the Aristotle University of Thessaloniki (2017) The van Niel International Prize for Studies in …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
I was introduced into what a government lab and what this future could look like. Edward Lu : I think this internship is gonna help me in the future because it just showed me when people have a goal and … bioformatics, so that’s what I’m gonna take with me to the future.  Shari Larsen : I didn’t grow up with computers, and …
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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
This is the third and final episode of our series on a giant metagenome assembly from Wisconsin’s Lake Mendota. In the last two episodes, we’ve covered the specialized software and …
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A Grass Model to Help Improve Giant Miscanthus
… of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass … Miscanthus sinensis has been published. Analysis of the genome sequence also provides insights into how the multiple … and Environmental Research under Award Number DE-SC0018420. The work conducted by the U.S. Department of Energy …
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Ian Blaby
Dr. Blaby heads the DNA synthesis platform at the Joint Genome Institute, where he leads three groups focused on HTP … Institute for DNA construct design and assembly—present and future challenges. Synthetic Biology . 5: 1. 2020 Nguyen et. … energy. Plant biotechnology journal . 14: 1, 22-28. 2016 Blaby et. al., Genome‐wide analysis on Chlamydomonas …
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The genome portal of the Department of Energy Joint Genome Institute: 2014 updates
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Boosting Small Molecule Production in Super “Soup”
Program at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … the first time CRISPR-Cas9 had been used to modify a cell’s genome in order to create lysates with altered metabolic … fact in the field whatsoever.” Focusing on Carbon Flux and Future Directions The team reported producing BDO at the …
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User Advisory Committees
All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National … and strategic objectives of the microbial and metagenome programs. The committee serves as the program's key …
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located … Berkeley National Laboratory. The JGI consists of around 280 researchers and support staff in the Integrative Genomics …
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