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Tanja Woyke
… of California, Merced's School of Natural Sciences since 2015. Prospective users with specific questions regarding their … Editorial Board Member for ISME J (Senior Editor 2016-2021), Peer J (2015-2019), Scientific Data (2017-2019). … system components. Science 356, 82-85. Tsementzi et al. 2016. SAR11 bacteria linked to ocean anoxia and nitrogen …
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JGI Scientists Pen Genome Watch Articles
… writing for the Nature Reviews Microbiology column last year — and there’s more to come in 2020. Researchers at the … column appears in six issues of the monthly magazine each year.  Until then, the column had been written solely by … their editor. The partnership has proven so successful this year, JGI is providing another three Genome Watch articles. …
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Help from Citrus’ Bitter, Hardier Cousin
… ravaging citrus groves: citrus greening. From 2012 to 2016, in Florida alone this disease caused an estimated $4 … JGI’s Daniel Rokhsar, published over the last half-dozen years, on the ancestral origins of  Citrus sinensis , the …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… to boost understanding of environmental viruses. In 2016, Nikos Kyrpides at the JGI led a team that combed … the number of known viral genes by a factor of 16. The same year, the JGI expanded its existing Integrated Microbial … is six times larger than the previous one . To identify so many genomes, JGI researcher Antonio Camargo developed …
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Understanding Wildfire Recovery, Starting in Soil
A metagenomic look at the soil microbes present a year after a wildfire. The Science After a wildfire burns, … using both DNA and messenger RNA (mRNA) sequencing to identify those traits that have helped fungi, bacteria and viruses … Molecular Sciences Laboratory (proposal ID 49615), which is a DOE Office of Science User Facility. This …
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Products
Program Product Description Deliverables Cycle Time FY25 Q1  (median/75th percentile*) DNA Synthesis Constructs <5kb in size …
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John Vogel
… served as a Research Molecular Biologist at the USDA for 12 years where he was a driving force behind the development of … 11 (1), 1-16  https://doi.org/10.1038/s41467-020-17302-5 Varoquaux, et. al.N. 2019 Transcriptomic analysis of … Genetics and Genomics of Brachypodium. 2016 Vogel, J.P. Ed., Springer, Switzerland. ISBN: …
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Introducing New Members of the JGI User Executive Committee
… been an active user of the JGI at any time in the past two fiscal years is eligible for election to the UEC. Members serve three-year terms and can serve no more than two consecutive terms. …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
Q:  To what extent is natural soil a limit to identify molecules exchanged between plants and microbiomes during … in the field. By having transcriptomics data across 2 years, as well as a second field trial (which will include a … see this  Metabolomics Data Analysis – Tips from Users page.  Q:  Is the metabolic study able to build a profile …
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Igor Grigoriev
… the JGI Fungal Genomics program which resulted in over 2500 fungal genomes in the JGI MycoCosm portal. In 2018, he … deconstruction by anaerobic fungi.  Nature Microbiol. 8(4):596-610. Nelson et al (2022) Wildfire-dependent changes in … cylindrus.   Nature. 541(7638):536-540. Riley et al (2016) Comparative genomics of biotechnologically important …
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JGI Workshops at PAG
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
… to contact? A:  Contacts are listed on the proposal call page. Feel free to  reach out to any of them with questions. …
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