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… Research yields a comprehensive tree and soil dataset for understanding the dynamic relationship between poplar trees and their microbial partners. … (Berkeley Lab). All of this information — 318 metagenomes, 98 plant transcriptomes and 314 metabolomic … This research was sponsored by the U.S. Department of Energy, Office of Science, …

… Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hi again, and welcome to Episode 6 … among lots of other things, he works on the Tiny Earth project, which you’ll hear him describe. [ Go here to learn … the secondary metabolism side of things was looking at genomes and seeing where the really hard things to sequence …

… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … of Bacteria and Archaea (GEBA) initiative. “This project has helped to define the current shape of the … Repertoire in Actinobacteria Over the years more than 3,400 genomes have been sequenced from curated DSMZ isolates, for …

… Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a broader … The project was funded by the U.S. Department of Energy Joint … Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231 within the framework of the …

… Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there. This is Dan again, and … we can find more things. Turns out some of the early genomes that were sequenced for, say, Streptomyces – they … we need people from outside of the JGI to come to us with projects that will help us actually drive this strategic …

… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of interest. One such effort is targeted at environmental cells that are from candidate phyla, major branches … in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to …

… Machine learning methods were applied on sequenced fungal genomes to classify gene families. The … data generated in part through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The Impact … and  IOS-1456958 . Sequencing of  Dothideomycetes genomes were conducted as part of the 1000 Fungal Genomes …

… Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hi, again. This is Dan, and you’re … and you can see that different Frankia have different size genomes depending on what kinds of plants, and what kinds of … in partnering with us, we want to hear from you! We have projects in genome sequencing, DNA synthesis, …

… Database provides details on river microbes in 90% of US continental watersheds. The … Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the watersheds … anything. The collaborative consortium behind the GROWdb project demonstrates not only how researchers can …

… curator there, with a broad range of experimental work on plants for drug discovery in antibiotics, anticancer, and … find me. And really it was my third grade science fair project where I first looked into a microscope and just fell … it’s not that easy. There are still not that many plant genomes, certainly nowhere close to bacterial kinds of …

… Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Welcome back to Natural Prodcast! … so, so cheap to sequence. Right now, for our particular projects, we’re not doing that right now, but we might. I …   DAN: Got it.    NANCY: And this is really to complete the genomes, and I’m really thankful for this. It sort of goes …

… Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there and welcome back for Episode 8 of Natural Prodcast. This week, we … so I’m hoping we can follow up with him again as the project progresses! If you’re interested in RiPPs, I’ll put …