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… When the JGI Data Portal (https://data.jgi.doe.gov/) launched last year, … the plant portal  Phytozome . Now the portal offers a way for users to more easily access public data sets through a common set of metadata. For Steve Wilson, JGI’s Systems Engineering group lead, the …

… fungal genomes, omics data and comparative analysis tools. Questions and Answers 1.  Q(uestion): Do you accept oomycetes to be proposed for genome sequencing, or only “true fungi”? A(nswer): Our … use filtered models than non-filtered? A: Filtering is an automated attempt to identify the best representative gene …

… of secondary metabolism.  DAN: Hey there and welcome back for Episode 8 of Natural Prodcast. This week, we have our … learn how to make peptides, rationally. We’d find these tools, we’d understand them, and we’d apply them. And so, I … proteins interact with each other. There’s a lot of leading data from excellent groups about specific interaction …

… Program and the development of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the … focus on Microbiome Research with an emphasis on Microbiome Data Science. His group is developing novel methods for … Nat Microbiol . 6(7):960-970. Nayfach S, et al. (2021) CheckV assesses the quality and completeness of …

…   Gain access to omics technologies generating community data at zero cost —  submit a proposal.  … All the sampling activities in Antarctica have been performed in the frame of italian expeditions of the Italian National Program for Antarctic Researches (PNRA),  funded by the Italian …

… protocols provided by JGI and the JGI user community below for DNA preparation tools, high molecular-weight DNA extraction and RNA … Tips for High Molecular Weight DNA extraction: …

… JGI researchers lend expertise to develop tools and data hub for NIH program. While the microbes in, on and around Earth … tools for viral genomics. Notable examples include CheckV , which assesses the quality and completeness of … address some of the most pressing challenges of our time. For more information, please visit  …

… has a long-term partnership with the HudsonAlpha Institute for Biotechnology for our Plant Program, and is further … Energy Research Scientific Computing Center (NERSC) and data infrastructure projects—the DOE Systems Biology … (NMDC)—to provide access to datasets, workflows, and tools to seamlessly expand data functionality. Close …

… The IAC is chartered by the JGI Chief Informatics Officer (CIO) and reports to the JGI Director. The … on the effective management and strategic objectives for the JGI’s data science, informatics and information technology (IT) …

… Sugarcane was the last major crop without a reference quality genome and now crop researchers can work toward … world’s most harvested crop by tonnage, sugarcane accounts for 80% of global sugar production. A reference genome for … The reference genome of R570 is available on the JGI plant data portal,  Phytozome .   …

… to Natural Prodcast! This is episode 4! From here on out, for a while, we’re going to be presenting some conversations … the feed, the secondary metabolism field has been dominated for … well, as long as I can remember, by bacterial … Aspergillus was pretty good, but, you know, just from a data standpoint, just figuring out introns and dealing with, …