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Microbiome Data Science Team
… and comparative analysis of thousands of archaeal and bacterial type strains ( GEBA-type strains project ), the … Mukherjee S, et al. (2017) 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree … EA, et al. (2016) Global metagenomic survey reveals a new bacterial candidate phylum in geothermal springs.  Nature …
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Virus Discoveries that Keep Getting Bigger
… hosts. In doing so, they influence ecosystem-level nutrient cycling and carbon storage. For example, the marine algae  Emiliania … blooms in the ocean that cycle environmental carbon and sulfur. A giant virus, the  E.   huxleyi virus, plays a key …
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Major role of nitrite-oxidizing bacteria in dark ocean carbon fixation
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Natural Prodcast Episode 12: Nadine Ziemert
… which is still hard to do. We are mining a lot of environments to see where are environments that have the most potential to actually make … metabolites. ALISON TAKEMURA: What are some of these environments? NADINE ZIEMERT: So we started with soil. But …
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FICUS-NERSC/KBASE
… genomics to solve the most relevant bioenergy and environmental problems.  The mission of the National Energy …
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Partnerships: Adopt-A-Genome
… genomes (MAGs), and 40,000+ metagenomes along with curated environmental- and other metadata to enable comprehensive … R. Seshadri, M. Escobar. Draft genome sequences of two bacterial type strains isolated from a methanogenic … Draft genome sequences of three ruminant-associated Eubacteriales: Eubacterium ruminantium ATCC 17233T, …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… how unique they are, how they survive in this hypersaline environment, which can range from 8% to 28% salinity. We … there. So we’re looking at how they adapt to these extreme environments. And then can we use that, for example, like … million BGCs in the database on the release, and that’s the bacterial stuff. Could be more. [CHUCKLES] I’m not quite …
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Rex Malmstrom
… the first ever measurements of in situ growth rates and carbon consumption of SAR11 bacteria, the most abundant bacterial group in the ocean. Later during his postdoctoral … a high throughput approach for isolating individual bacterial cells and amplifying their genetic material, thus …
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Recurring patterns in bacterioplankton dynamics during coastal spring algae blooms
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Metagenomics Reveal Dynamic Coastal Ocean Reservoir of Antibiotic Resistance Genes
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JGI Advisory Committees Code of Conduct
… so that together we can foster a respectful, collaborative environment free of harassment. To uphold Berkeley Lab’s …
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Acquisition of host-derived carbon in biomass of ectomycorrhizal fungus pisolithus microcarpus is correlated to fungal carbon demand and plant defences.
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