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DAP-seq Drives Robust Mapping of Gene Regulation
… falling. As  published online in  Nature Plants  on July 15, researchers have developed multiplexed assays — … 150 million years of evolution,” said Leo Baumgart, first author on the paper and Technical Implementation Lead at the … from humans or mice,” said Sharon Greenblum, a co-first author on the paper and computational biologist at the JGI. …
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Boosting Small Molecule Production in Super “Soup”
… chemical products,” said Jewett, one of the study’s senior authors. “But this has been done most commonly in … student Blake Rasor. He and Yi, one of the study co-authors, have maintained a regular shipment schedule, with … In this cell-free environment, reported Rasor, first author of the study, the lysate produced BDO at higher …
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How Maize Makes An Antibiotic Cocktail
… zealexins. Even though scientists have identified at least 15 zealexins, they suspect there are even more to find. … feedstock and  JGI Flagship Plant — could produce at least 15 zealexins. Moreover, zealexin biosynthetic enzymes would … been largely overlooked, according to the study’s senior author Alisa Huffaker, a biologist at the University of …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… Lovell, an evolutionary biologist at HudsonAlpha and first author of the study. “For that, it’s necessary to have the … Tom Juenger, a longtime JGI collaborator and a senior author on this study. The use of switchgrass as a feedstock … version of the genome is assembled into sequences of 5.5 million basepair (bp) in length, while the previous …
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New Microviridae isolated from Sulfitobacter reveals two cosmopolitan subfamilies of single-stranded DNA phages infecting marine and terrestrial Alphaproteobacteria
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Water aging and the quality of organic carbon sources drive niche partitioning of the active bathypelagic prokaryotic microbiome
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… usually visible without the assistance of microscope. “It’s 5,000 times bigger than most bacteria. To put it into … biology at the Université des Antilles and a co-first author on the study, performed the 16S rRNA gene sequencing … JGI’s Microbial Program and is one of the article’s senior authors. The team was also compelled to study these large …
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Water mass age structures the auxiliary metabolic gene content of free-living and particle-attached deep ocean viral communities
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Natural Prodcast Episode 5: Brad Moore
… because I was always swimming or surfing. And you know, 25 hours a day we’re at the beach practically. It was just – … has been a lot of fun for us in recent years. Started in 2015, when two things happened. One, a new graduate student … bloom ever observed on planet Earth. This was the 2015 Pseudonichia diatom bloom. It made a toxin called domoic …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… — ‘What are they doing? How do they interact?’” said senior author Francis Martin, a Research Director Emeritus at the … Auer, a research engineer at INRAE and one of the first authors of this work.  To compare these trophic guilds, this …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… is especially rewarding. Wint is listed as the primary author on this publication and drove the entire project, …
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… of microbiology at Ohio State University and senior author of this work.  North led the team that did this work. … Yoshikuni, head of the JGI’s DNA Synthesis program and a co-author on the paper. First a pathway, then a purified enzyme …
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