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A Step Toward Controlling Soybean Rust
… produce biodiesel. The fungus  Phakopsora pachyrhizi causes Asian Soybean Rust (ASR) and is the major pathogen of soybean. Left uncontrolled, soybean rust could reduce crop yields by as much … plant genome , and JGI  published its genome sequence in 2010.       …
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Rex Malmstrom
… is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ growth rates and carbon consumption of … University of Delaware BA in Biology, Boston University ( magna cum laude ) …
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Natural Prodcast Episode 22: Alison Narayan
… DAN UDWARY: Hey everyone. Welcome back to Natural Prodcast. This continues the series of interviews we recorded at … candy corn, which is perfect timing for an October podcast release. I hope that doesn’t get me canceled.The monthly … In this episode, Dan and Jackie talk to Alison Narayan , from the University of Michigan’s Life Sciences …
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Improving the Cacao Genome and Phytozome
… brands can’t exist without cocoa According to the  International Cocoa Organization (ICCO), global cocoa bean production … and ensure there will be cocoa for chocolate tomorrow In 2010, a draft first genome of  Theobroma cacao  – the tree that produces cacao beans – was released by a Mars, Inc.-led consortium through the Cacao …
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A Practical Approach to Using the Genomic Standards Consortium MIxS Reporting Standard for Comparative Genomics and Metagenomics
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Metagenomic Methods for Addressing NASA's Planetary Protection Policy Requirements on Future Missions: A Workshop Report
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Team Science Reveals Important Protein in Poplar
… Knockout experiments showcase potential for engineering bioenergy crops The Science Scientists at Brookhaven National Laboratory (BNL) led a team that  identified a protein … be hybridized to produce desirable traits.  Partly enabled by the JGI  Community Science Program New Investigator …
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What Happens Underground Influences Global Nutrient Cycles
… projects. Through the Facilities Integrating Collaborations for User Science (FICUS) program, two Department of … proposals addressed one of the following focus topic areas: Biofuels and bioproducts, Biogeochemistry, and … mutant library in Chlamy, as the alga is colloquially known by researchers. A missing gene from this mutant library …
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Computationally Classifying Fungal Lifestyles
… Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of concept, … enabled in part through  JGI’s  Community Science Program (CSP) , as several approved proposals have contributed toward … The work conducted by the U.S. Department of Energy Joint Genome …
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DNA Synthesis Program
… of biofuels, biochemicals and other bioenergy solutions.  The program has been a pioneering effort in functional genomics since 2012, with a … Synthesis Program plays a central role in advancing functional genomics, focusing on developing genetic systems that …
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Boosting Small Molecule Production in Super “Soup”
… Do metabolic pathways from engineered yeasts still work in cell-free environments? (Spoiler: Yes.) Think of cells as tiny factories: … for maintenance to keep processes running smoothly. As reported August 26, 2021, in Nature Communications , … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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First Monoploid Reference Sequence of Sugarcane
… Sorghum genome serves as a reference for the highly complex sugarcane genome . The … Most species are diploids and have two sets of chromosomes, one from each parent. In contrast, many crops have multiple … now underway as part of the JGI Community Science Program (CSP), a critical factor in developing sugarcane as a …
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