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The genome portal of the Department of Energy Joint Genome Institute: 2014 updates
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Science Programs
… The JGI’s Science Programs offer support to users and their research efforts.  JGI scientists lend their expertise to enhance the scientific impact of user projects, develop cutting-edge approaches for and with … with the JGI on their research. Click below to learn more about our individual Science Programs.  …
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JGI announces 2023 CSP Functional Genomics awardees
… functional genomics research from potential users who need help translating genomic information into … are accepted year-round; the next deadline is Jan. 29, 2024.  …
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Single Nucleotide Polymorphism Charting of P. patens Reveals Accumulation of Somatic Mutations During in vitro Culture on the Scale of Natural Variation by Selfing
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Integrating Experimentation with Data
… $500     Students: $200      Postdocs: $250     Industry: $700    Thanks for joining the Joint Genome Institute … Experimentation with Data” was held at the Seattle Marriott Waterfront in Seattle, Washington.  Topics … featured insightful presentations, dynamic panel discussions, informative poster sessions, thought-provoking …
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Jeremy Schmutz
… improvement strategies for de novo sequencing of eukaryotic organisms from simple yeasts to large vertebrate genomes.  … years, Mr. Schmutz has directed the JGI Plant Program, focusing on the organization of community driven science for JGI Plant … Plant Science Program Head at the JGI. Click to learn more about the program's areas of focus, major initiatives and …
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Fungal and plant gene expression in the Tulasnella calospora–Serapias vomeracea symbiosis provides clues about nitrogen pathways in orchid mycorrhizas
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Simon Roux
… the development of novel computational tools to identify virus sequences, the design of new experimental approaches to … with JGI users for analyzing viral datasets, and the organization of community-building efforts in the field of … 12, 3076. Roux et al., 2018. Minimum Information about an Uncultivated Virus Genome (MIUViG). Nature …
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Webinar: MycoCosm Tutorial
… Learn more about JGI’s  MycoCosm data portal , an interactive … genome sequencing, or only “true fungi”? A(nswer): Our focus is on fungi, algae, plants, and the microbial world but … genomes. Our annotation pipeline can call scaffolds as “primary” and “secondary”, and designates alleles accordingly. …
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Microbial Program
… The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis … of terrestrial biogeochemical cycling and inter-organismal interactions. These insights are crucial for … The Microbial Program focuses on using advanced sequencing technologies to explore …
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UC Merced Interns Reflect on Their JGI Summer Projects
… wide — from implementing new data visualization tools, to using natural language processing techniques to categorize genetic information. Learn more about their work here in a series of videos produced by JGI … Intern: Brendan Blasius (undergraduate) Mentor: Guohong "Albert" Wu Click the …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… viridis), a small model grass with a short lifecycle that uses a carbon fixation process known as the C4 pathway, … C4 crops, as are the candidate biofuel feedstocks Miscanthus and switchgrass.  Innumerable road trips and hundreds of … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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