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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature … noted this may be the first publicly available, river-focused microbial resource that provides information at … also funded under the RC-SFA at PNNL by DOE BER ESS. Metagenomic and metatranscriptomic sequencing was performed at …
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Genome organization and botanical diversity
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Integrating Experimentation with Data
… data integration and modeling This three-day joint user meeting will feature insightful presentations, dynamic panel discussions, informative poster sessions, thought-provoking … Biological and Environmental Research (BER) program.   … About the Organizers … Stefani Ferreira , administrative …
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Fungal and plant gene expression in the Tulasnella calospora–Serapias vomeracea symbiosis provides clues about nitrogen pathways in orchid mycorrhizas
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Building on basic metagenomics with complementary technologies
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User Support
… science. DOE JGI Project Managers collaborate with users to develop project requirements, define the scope of … with DOE JGI Science Program leads Solicit user feedback about your overall experience working with the JGI. Find out more about our Project Management Office (PMO) Project Management …
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Simon Roux
… the development of novel computational tools to identify virus sequences, the design of new experimental approaches to … with JGI users for analyzing viral datasets, and the organization of community-building efforts in the field of … 12, 3076. Roux et al., 2018. Minimum Information about an Uncultivated Virus Genome (MIUViG). Nature …
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John Vogel
Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior to this, he served as a Research Molecular Biologist at the USDA for 12 years where he was a driving force behind the … and utilizing these resources to understand genome organization and regulation, abiotic stress tolerance, and …
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A Genome-Wide Survey of Switchgrass Genome Structure and Organization
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2025 NeLLi Symposium
… microbial symbiosis.  This is a continuation of the previous NeLLi Symposia. In this 2025 Symposium, we will showcase … on November 6-7 focused on improving cultivation and genomic coverage. Experts in cultivation and environmental … John M. Archibald (Keynote) Dalhousie University  Harriet Alexander Woods Hole Oceanographic Institution Matthew Brown …
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Len Pennacchio
Pennacchio joined the DOE Joint Genome Institute and has focused on applying state-of-the-art molecular methods to … Lawrence Berkeley National Laboratory … The Deputy of Genomic Technologies serves as the JGI’s primary point of … in Genome Biology & Technology (AGBT)” … Education … About the Deputy of Genomic Technologies … Selected …
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Differences in sequencing technologies improve the retrieval of anammox bacterial genome from metagenomes
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