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Genome-Resolved Metaproteomics Decodes the Microbial and Viral Contributions to Coupled Carbon and Nitrogen Cycling in River Sediments
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Frederik Schulz
Dr. Frederik Schulz joined the DOE Joint Genome Institute in 2016 and is leading the New Lineages of Life Group. His research … program on agnostic pathogen detection and surveillance in complex samples. … B.Sc. Biochemistry, University of Applied …
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Uncovering Novel Genomes from Earth’s Microbiomes
Large-scale comparative analysis leads to identification of … methods in the past decade, researchers have uncovered genomes for just a small fraction of Earth’s microbial … he’s interested in expanding the diversity of the reference database he’s developing called the  Microbial …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … the University of Texas at Austin produced a high-quality reference sequence of the complex switchgrass genome. The reference genome built off …
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FICUS
The Facilities Integrating Collaborations for User Science … DOE National User Facilities in one research proposal.  Successful applications will focus on high-risk/high-payoff … beyond what each of these facilities could generate by itself.   Accepted projects must address or be otherwise …
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Constructing a yeast to express the largest cellulosome complex on the cell surface
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The genome of the soybean cyst nematode (Heterodera glycines) reveals complex patterns of duplications involved in the evolution of parasitism genes
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Multiple Maize Reference Genomes Impact the Identification of Variants by Genome‐Wide Association Study in a Diverse Inbred Panel
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A chromosome‐scale reference genome of trifoliate orange (Poncirus trifoliata) provides insights into disease resistance, cold tolerance and genome evolution in Citrus
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Natural Prodcast Episode 2: The Primer, Part 2
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … of these little white spots around, and those are Streptococcus bacteria – a kind of bacteria that you know, causes …
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place where you can … evolutionary diversity, algal genomes can be incredibly complex and difficult to sequence and understand. A team of …
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DOE Metrics
FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal Actual … developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – Report on progress … developing new experimental capabilities to analyze complex genomic or metagenomic datasets. [Download PDF] Q3 – …
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