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JGI@25: Studying Sorghum’s Survival Skills
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … carbon dioxide and water into sugars and oxygen. Both sugarcane and corn share this photosynthetic pathway. … as well. In 2009, the JGI sequenced and analyzed the first reference genome for Sorghum bicolor . Since then, 2,993 …
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FICUS-NERSC/KBASE
… The mission of the Joint Genome Institute is to serve the scientific community as a user facility pioneering functional genomics to solve … Research Scientific Computing Center ( NERSC ) is to accelerate scientific discovery at the DOE Office of Science … The researcher then submits a proposal for consideration in the next …
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A unified catalog of 204,938 reference genomes from the human gut microbiome
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Assembly, comparative analysis, and utilization of a single haplotype reference genome for soybean
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2024 Progress Report
… The Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems … to support the global research community in studies of complex biological and environmental systems. We optimize … A record number of primary users — 2,456 — had active …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… By leveraging new tools and large-scale data mining, JGI researchers … markers for classifying species and studying diversity in complex biological systems. By making the tools and data … genomes. The team first applied the workflow to a curated reference set of over 300 genomes spanning the fungal …
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A sorghum genome-wide association study (GWAS) identifies a WRKY transcription factor as a candidate gene underlying sugarcane aphid (Melanaphis sacchari) resistance
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Isolation and sequencing of a single copy of an introgressed chromosome from a complex genome for gene and SNP identification
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1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life
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The reference genome and abiotic stress responses of the model perennial grass Brachypodium sylvaticum
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The Sorghum bicolor reference genome: improved assembly, gene annotations, a transcriptome atlas, and signatures of genome organization
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JGI@25: Using Team Science to Build Communities Around Data
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … the effort to sequence 1000 fungal genomes to create two reference genomes for all fungi families — essentially, the … Plant Program, including genomes that are both large and complex. The first publication of a genome generated by the …
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