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… available on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) platform. Nikos Kyrpides and  Simon Roux … a large-scale comparison of 135 fungal sequenced genomes to understand how plants and fungi developed symbiotic relationships, and how …

… The products of photosynthesis are easy to point out. Plants, algae and cyanobacteria create the air we breathe … work in  Nature Communications takes on the challenge of understanding one of these proteins — and its role in … is a very interesting regulator that can make the link between photosynthesis, respiration and high-iron …

… to living in extreme conditions. At these vents, and underwater volcanoes,  researchers studied microbial … are available on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) portal. The study,  published in the  Microbiome journal, broadens our understanding of the unique …

… that supports “an unprecedented assembly of environmental microbiomes.” JGI’s Chief Informatics Officer  Kjiersten Fagnan touted the long-standing collaboration between JGI and the ExaBiome team. “They produced fantastic …

… learning. Vector representations allow homology searches between proteins to become much simpler; instead of aligning … hidden Markov models (HMMs), “You just compute the distance between two vectors,” said Sevim.  While there are … is part of an ongoing effort to build greater collaboration between JGI and scientists in the Computational Resources …

… to access the JGI’s  Integrated Microbial Genomes and Microbiomes (IMG/M) system. For example, the team has since … monitored and the team plans to continue collecting data to understand the ERD process.  … Office of Science of the U.S. Department of Energy operated under Contract No. DE-AC02-05CH1123. Partial support was …

… the mobile genetic elements, or MGEs, that can move between organisms. But now, deep sequencing and new analysis …

… : Ben Cole & Axel Visel, Genomics of Plant-Microbial Interactions “The summer internship has further confirmed by …   “This summer internship has broadened my skills and understandings in the field of genomics. This has reinforced …

… organisms may evolve.  Determining the genetic codes of plants is often challenging because in many plants chromosomes are present in more than two copies, a … is likely the most important, but also the ability to understand the complicated evolutionary history of …

… at the University of East Anglia, leads this effort to understand what makes polar photosynthesizers tick. He’s …

… Intern: Sidharth Babu (undergraduate) Mentor: Zhong Wang Click the image to watch … Intern: Brendan Blasius (undergraduate) Mentor: Guohong "Albert" Wu Click the image … Intern: Jacob Espinosa (undergraduate) Mentor: Virginia Scarlett Click the image to …

… Every year, the JGI sequences around 35,000 samples — from plants, algae, bacteria, archaea, fungi, viruses — to …