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Tracing the Evolution of Shiitake Mushrooms
… New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science … Shiitake mushrooms get their name from the same place they often source their nutrients — the shii tree, a Japanese … a  genomic look at Lentinula samples from around the world. By complete sequencing of 24 new mushroom genomes, and …
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Thawing permafrost, microbes, and viruses: Gary Trubl — Part 1
… wants to understand how viruses impact the release of greenhouse gases from Arctic permafrost. But to see what …
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JGI Workshop at SIMB NP Meeting
… Metabolism   Although there are still a large number of secondary metabolites yet to be discovered and their … accessing these untapped metabolic capabilities is often tedious and resource intensive. This is often due to, for example, tight regulation of biosynthetic …
Learn more
Computationally Classifying Fungal Lifestyles
… genomes to classify gene families. The Science As a proof of concept, researchers developed an algorithm that “taught” … genomes of Dothideomycetes, the largest class of fungi, by lifestyles. The machine “learned” to identify data … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Waiting to Respire
… Genomes from uncultivated bacteria offers clues to ancestral bacteria’s energy sources. More … ability to produce their own food and generate oxygen as a byproduct. The abundance of oxygen shaped the evolution of life on Earth, and led to … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… us with your questions ([email protected]) Carefully read our proposal call description and ensure your … and relevance to the DOE’s mission.  Have someone proofread your proposal to make sure the goals, experimental … analytics platform provided to the research community by DOE. Email [email protected] if you have questions about …
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A Step Toward Controlling Soybean Rust
… causes Asian Soybean Rust (ASR) and is the major pathogen of soybean. Left uncontrolled, soybean rust could reduce crop yields by as much as 90 percent. As part of the DOE Joint Genome Institute’s  2016 Community Science … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… A two-day kick-off meeting held at Lawrence Berkeley National Laboratory (Berkeley Lab) marked the visit of an esteemed interdisciplinary delegation from the … multi-monodispersed droplets in a two-dimensional plane by moving different fluids together in a controlled manner. …
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The JGI Data Portal: Improving User Experience
… The human-centered, agile collaboration between the JGI and the … from the other JGI Portals, as well. “For thousands of scientists around the world, the JGI Genome Portal is a … more broadly represent JGI’s data. It includes several user-validated features and updated functionality, such as: The …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
… just one research proposal. Guest speaker Michelle O’Malley of UC Santa Barbara talked about how her approved FICUS … Collaborations for User Science” (FICUS) program. Letters of Intent are due March 17, 2021. Q&A from the Webinar: … on the proposal call page. Feel free to  reach out to any of them with questions. Q:  Apart from instrumental support, …
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Webinar: Introducing the BioSANS capability
… on “Integrated Multi-omics Analyses for the Prediction of Metabolic Flux in. Lignin Conversion”       … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… National Ecological Observatory Network (NEON) is a network of field research sites designed to collect long-term open … available for research over 100,000 samples and specimens of over 60 different types of NEON samples and specimens per … webinar complements a  recent webinar co-hosted by the JGI and EMSL inviting researchers to apply for a …
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