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High-quality permanent draft genome sequence of Ensifer sp. PC2, isolated from a nitrogen-fixing root nodule of the legume tree (Khejri) native to the Thar Desert of India
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Complete genome sequence of Geobacillus thermoglucosidasius C56-YS93, a novel biomass degrader isolated from obsidian hot spring in Yellowstone National Park
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JGI@25: Studying Sorghum’s Survival Skills
… but other important crops as well. In 2009, the JGI sequenced and analyzed the first reference genome for … genome. Sorghum was the second cereal crop with a fully sequenced genome (following rice in 2002) and the first C4 … and Extension Center. 2017: The JGI and collaborators sequence and annotate the Sorghum bicolor reference genome, …
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JGI@25: Using Team Science to Build Communities Around Data
… Spatafora of Oregon State University led the effort to sequence 1000 fungal genomes to create two reference genomes … by more than 100 participants. Roughly 700 have been sequenced and annotated, representing 384 fungal families … Open Green Genomes project. “We currently have 19 genomes sequenced, 15 that are in sequencing or assembly right now, …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… National Laboratory, used single-cell sequencing to sequence both a cell’s genome and detect accompanying viral sequences, which would suggest the virus had been infecting … abundance of a virus relative to its host (inferred through sequence data) can suggest different predatory behaviors. A …
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Evolution of a Fungal Gene Expression Regulator
… in fungi. The Science Changing an A, C, T or G in a genome sequence can lead to changes in protein structures and …
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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site
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JGI & KBase at PAG XXVII
… integrative biology. Researchers who are applying genomic sequence information to BER-funded activities of plant …
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DAS Tool for Genome Reconstruction from Metagenomes
… and improved upon a tool that combines existing DNA sequence binning algorithms, allowing them to reconstruct … isolating and characterizing entire microbial genomes from sequences generated from environmental samples. The work … enhance the ability to assemble often-fragmentary DNA sequences from environmental samples of very complex …
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Steven Wilson
… project and work order creation and management, automated sequence quality control and automation of …
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Triggering Morel Fruiting
… M. importuna CCBAS932 from the forests of France, were sequenced and annotated by a collaborative team. The genome sequences and annotations are available on JGI’s fungal …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… collaboration, in 2017, they published the first genome sequence of a cold-adapted microalga: the diatom …
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