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Computationally Classifying Fungal Lifestyles
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … in Mycology . This work was enabled in part through  JGI’s  Community Science Program (CSP) , as several approved … (green). (From Haridas S et al.  Studies in Mycology , 2020.) Using whole genome data from newly sequenced genomes, …
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Fungal Friends or Foes in Plant Roots
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Communications paper . The work was partly enabled by a JGI Community Science Program (CSP) proposal led by INRAE’s … from natural Arabidopsis populations around Europe. The JGI sequenced and annotated 41 fungal isolates from the …
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Picking Up Threads of Cotton Genomics
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … lineages. Senior authors of the  paper published April 20, 2020 in  Nature Genetics include Jane Grimwood and Jeremy Schmutz of JGI’s  Plant Program , both faculty investigators at the …
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Forming Scientific Connections and Building Community
… The 11th cohort of JGI-UC Merced interns pick highlights from their summer … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, hosted three … and having responsibilities. I like the environment that JGI brings and being able to be a part of groundbreaking …
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Ancient Algae Reveal Secrets of Plant Evolution
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … three strains of  Zygnema circumcarinatum . Published  May 2024 in  Nature Genetics by an international research … The algal genomes sequences are available on the JGI’s  PhycoCosm portal. …
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New Research Sheds Light on Diversity in the Deep Sea
… the communities studied. The datasets are available on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) …
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A Natural Mechanism Can Turbocharge Viral Evolution
… the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility located at … data, approximately half of which was generated by the JGI, to uncover these DGRs. DGRs were found in single … team and is the head of the Viral Genomics group at the JGI, thinks that if you’re a virus or a microbe with a DGR, …
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Crops as Tough as World Cup Turf
… to be the same species that covered World Cup pitches in 2022.                     …
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iPHoP: A Matchmaker for Phages and their Hosts
… Research Program awarded under UC-DOE Prime Contract DE-AC02-05CH11231. The work conducted by the U.S. Department of … U.S. Department of Energy operated under Contract No. DE-AC02-05CH11231 (SR, APC, SN).  …
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Open Frameworks Training the Next Generation of Scientists
… faculty and researchers at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility, and the DOE Systems Biology Knowledgebase (KBase). The JGI and KBase are both supported by the DOE Biological and … data. Undergraduate educators are partnering with the JGI and KBase to tap into their existing infrastructures and …
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Tracing the Evolution of Shiitake Mushrooms
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … and DEB-1442113 to A.R., the Department of Energy award 0000238431 to D.H., the GENOBIOREF (BIO2017-86559-R) project of … conducted by the US Department of Energy JGI (https://ror.org/04xm1d337), a DOE Office of Science …
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Complete genome sequence of the thermophilic, hydrogen-oxidizing Bacillus tusciae type strain (T2T) and reclassification in the new genus, Kyrpidia gen. nov. as Kyrpidia tusciae comb. nov. and emendation of the family Alicyclobacillaceae da Costa and
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