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The JGI Data Portal: Improving User Experience
… Portal , a pilot download experience accessible from JGI’s plant portal Phytozome . Although the Data Portal is … all the data associated with the latest version of the plant portal, weren’t able to complete this task. Improving … work on IMG and GOLD,” said Steve Wilson, head of the JGI’s Systems Engineering Group. “Our team’s ultimate goal is to …
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DAS Tool for Genome Reconstruction from Metagenomes
… functions in processes ranging from nutrient cycling to plant health and growth. Developing a scalable computational … genomes, particularly from incredibly complex soil microbial communities, is crucial to understanding how these … improving methods for isolating and characterizing entire microbial genomes from sequences generated from …
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Mike Sneddon
… AP, et al. KBase: The United States Department of Energy Systems Biology Knowledgebase. Nature Biotechnology 36, …
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An Automated Tool for Assessing Virus Data Quality
… microbes that play key roles in cycling nutrients such as carbon, nitrogen and sulfur are themselves regulated by … the genomes of these viruses and associate them with their microbial hosts. However, assembling viral genomes from … from IMG/VR , a database that is part of the Integrated Microbial Genomes & Microbiomes (IMG/M) suite, as well as …
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Dissecting the dominant hot spring microbial populations based on community-wide sampling at single-cell genomic resolution
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Microbial life under ice: Metagenome diversity and in situ activity of Verrucomicrobia in seasonally ice‐covered Lakes
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Optofluidic Raman-activated cell sorting for targeted genome retrieval or cultivation of microbial cells with specific functions
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Sediment microbial communities in Great Boiling Spring are controlled by temperature and distinct from water communities
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Flooding and ecological restoration promote wetland microbial communities and soil functions on former cranberry farmland
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Coupled laboratory and field investigations resolve microbial interactions that underpin persistence in hydraulically fractured shales
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Major changes in microbial diversity and community composition across gut sections of a juvenile Panchlora cockroach
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In vitro Characterization of Phenylacetate Decarboxylase, a Novel Enzyme Catalyzing Toluene Biosynthesis in an Anaerobic Microbial Community
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