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Engineering a Synthetic Escherichia coli Coculture for Compartmentalized de novo Biosynthesis of Isobutyl Butyrate from Mixed Sugars
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Genome-resolved correlation mapping links microbial community structure to metabolic interactions driving methane production from wastewater
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Low Mutation Rate and Atypical Mutation Spectrum in Prasinoderma coloniale: Insights From an Early Diverging Green Lineage
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JGI Announces 2026 Functional Genomics Recipients
… Pictured from left: [Above] Hanin Alzubaidy, Markus Covert, Sheel C. Dodani, … Joint Genome Institute (JGI) accepts proposals for state-of-the-art functional genomics research from scientists who … ranging from engineering microbial enzymes that unlock novel biochemical pathways, to exploring how microbes …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… Researchers looked across many organisms to see that … characteristics — creating many different ways of processing nitrogen. To boost crops more efficiently in … to the way many organisms function, they have a sense of why nitrogen metabolisms can be so varied.  As evolution has …
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JGI Advisory Committee
… The JGI Advisory Committee (JAC) is convened by the JGI Director to provide guidance on … external advisory body, the JAC includes representatives from all specialized JGI advisory and executive committees, …
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Analyze Data
… The JGI supports the entire data life cycle — from experimental design to reuse. Armed with the … The JGI is involved in efforts to integrate data in support of new research questions that span domains. We also work … Chief Informatics Officer …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… As SIP experiments shed more light on microbial communities … a  Minimum Information for any Stable Isotope Probing Sequence (MISIP) . They differentiate between required … this metadata, you are now enabling these much larger comparisons down the line,” Malmstrom said. In addition to …
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A Community Resource for Secondary Metabolite Researchers
… The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to the core set of "primary metabolites"—chemical compounds shared by most … time of publication, it is the largest repository of BGC sequence data from over 1.3 million publicly available …
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Complete Genome Sequence for Asinibacterium sp. Strain OR53 and Draft Genome Sequence for Asinibacterium sp. Strain OR43, Two Bacteria Tolerant to Uranium
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Programs & Platform Leads
… As an Integrative Genome Science User Facility, the JGI … genome science capabilities to support BER's mission of achieving a predictive understanding of complex … Metabolites, and DNA Synthesis Science Programs and draw from the infrastructure of Genomic Technologies and Data …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … candidate bioenergy feedstock crop. In 2018, the JGI had sequenced and assembled the genomes of two varieties of a … P. virgatum on Phytozome … Plant Dataset …
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