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Triggering Morel Fruiting
… led by Hao Tan from the Sichuan Academy of Agricultural Sciences in China and involving Francis Martin from the … and Igor Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility,  reported on … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …
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SIPs with Standards
… Isotope Probing (SIP) is a powerful technique for studying microbial communities. These experiments can show which … catch: SIP labwork and analysis can be very demanding.  The JGI offers SIP analysis to make these experiments accessible … multiple teams and analyses. This episode, Rex Malmstrom (JGI), and Roli Wilhelm (Purdue University), share a few …
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Six join FICUS program in 2026
… The JGI is excited to welcome six to the Facilities Integrating … year 2026, in partnership with the Environmental Molecular Sciences Laboratory (EMSL) and other national user … increasingly collaborative and multidisciplinary nature of DOE mission science projects, this proposal call aims to …
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Predominant Acidilobus-Like Populations from Geothermal Environments in Yellowstone National Park Exhibit Similar Metabolic Potential in Different Hypoxic Microbial Communities
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Metagenome Sequence Analysis of Filamentous Microbial Communities Obtained from Geochemically Distinct Geothermal Channels Reveals Specialization of Three Aquificales Lineages
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Outreach Stories
… Interested in reading more JGI intern and mentor success stories? Read more below. …
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Matthew Kellom
… Matt is broadly interested in the interactions between microbial life and environment, and using metagenomics to study these complex natural systems. Microbial communities living in hard-to-reach places that …
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T-Toxin Virulence Genes: Unconnected Dots in a Sea of Repeats
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DAP-seq Drives Robust Mapping of Gene Regulation
… plant lineages. Aligning with U.S. Department of Energy (DOE) interests, this advancement holds the potential to … Implementation Lead at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility located at Lawrence …
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All Events
… The JGI is represented at conferences year round; find out where …
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Mike Sneddon
… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics Department at the Joint Genome … and bioinformatics annotation pipelines that support JGI’s portals, tools, and the DOE’s emerging AI-enabled capabilities for science.  Dr. … in bacteria. Proceedings of the National Academy of Sciences of the United States of America 109(3), 805–810 …
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JGIota: A Tool to Find the Nomadic Genes that Help Microbes Adapt - geNomad
… snippet on Antonio Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like viruses …
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