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When “The Blob” Made It Hotter Under the Water
… Data from marine heatwave event may foreshadow climate change … This work was performed under the auspices of the Scientific Committee on Oceanographic …
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The Genome of the Acid Soil-Adapted Strain Rhizobium favelukesii OR191 Encodes Determinants for Effective Symbiotic Interaction With Both an Inverted Repeat Lacking Clade and a Phaseoloid Legume Host
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… New studies show methanogenesis is not exclusively for Euryarchaeota. Atmospheric levels of methane, a potent … research of these newly found methanogens  in diverse ecosystems with  support from a DOE Established Program to … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Hiroshi Otani
… Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has been studying secondary metabolism in microbes, particularly actinomycetes. His … BS, Engineering, Tokyo Institute of Technology Master's, Biotechnology, University of Tokyo PhD, … Kunakom S, Otani H, Udwary DW, Doering DT, Mouncey NJ. …
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Busting the Unbreakable Lignin
… New evidence shows anaerobic fungi can degrade the hardiest of plant components … to tackle when it comes to breaking down a plant for energy: Cellulose, hemicellulose and lignin, … Center. O’Malley is also affiliated with JBEI. The JGI data portals and pipelines helped identify potential genes …
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Streamlining Regulon Identification in Bacteria
… RIViT-seq technology could speed up associating transcription factors with their target genes. … regulation is critical to ensuring genes vital for growth and survival across various environments are expressed when their functions are needed. Data yielded through RIViT-seq expand the known …
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Viruses Reprogram Cells into Different Virocells
… Microbial cells infected by viruses undergo metabolic … infections can affect the interactions within their ecosystems. Summary Microbes drive the energy and nutrient … was done by the JGI, and proteomics and metabolomics analysis and microscopy at EMSL. The team infected the …
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Inaugural Critical Minerals & Materials Joint Research Portfolio Announced
… Pictured from left: [Top row]: Romy Chakraborty, Dawn Chiniquy, Anne Glaesener, Steven Hallam, … Genome Institute (JGI) and the Molecular Foundry (TMF) for their collaborative user program. The portfolio of … advanced genomic capabilities and access to large-scale data resources. Supported by the Basic Energy Sciences (BES) …
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An Addiction Crucial to a Fungus’ Reproduction
… A fungus relies on bacteria to regulate key components of … model, researchers also generated the first transcriptomic dataset of sexual reproduction in early fungi and discovered genes that are critical for this process. The Impact In the absence of the … This research was supported by the National Science Foundation and …
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JGI Announces 2026 Functional Genomics Recipients
… Pictured from left: [Above] Hanin Alzubaidy, Markus Covert, Sheel C. Dodani, … year, the Joint Genome Institute (JGI) accepts proposals for state-of-the-art functional genomics research from … expertise within the JGI, these projects integrate genomic data with cutting edge experimental techniques for …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… 2022 marks the JGI’s 25th anniversary. Over the last year, we’ve been revisiting a … a chemical and biological engineer at the University of California Santa Barbara. So plants don’t break down without a …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… As part of the JGI’s 25th anniversary celebration, the 2022 … Hardworking Team Todd Anderson , Director of the Biological Systems Science Division at DOE Office of Biological and … one second. “It isn’t just the generation of vast troves of data, it’s the new areas of scientific possibility that …
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