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… Choice Awards . NERSC, JGI, ESnet are U.S. Department of Energy Office of Science user facilities. The HPCwire … that supports “an unprecedented assembly of environmental microbiomes.” JGI’s Chief Informatics Officer  Kjiersten … in scale when running on DOE’s  exascale computing systems,” added Kathy Yelick, a professor of electrical …

… in Seattle, Washington.  Topics included:  Environmental Microbiomes Biodesign and Synthetic Biology AI/ML-enabled … The JGI and EMSL are U.S. Department of Energy (DOE) Office of Science national scientific user … worldwide to explore complex biological and environmental systems using advanced experimental and informatic tools at …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a … which imperils soybean harvests. The subsequent comparative analysis of these two pathogens, led by the JGI and Virginia … are annotated with the results of the lab SOD infection analysis. These collaborations represent the first-ever …

… A mini-episode looking at the efforts of Pankaj Trivedi, whose New Investigator proposal was … approved through the JGI Community Science Program, to use microbiome science to help make plants more resilient to …

… (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a … functional assessment, host prediction, and phylogenetic analysis. The development of CheckV helps researchers to … scientist Stephen Nayfach, the study’s first author in the Microbiome Data Science group led by Nikos Kyrpides. To …

… genome . Now, high-quality reference genome sequences of the male and female plants, each representing a single set of chromosomes, are available. The genome assemblies … and seed yield. Conversely, some crops such as bioenergy sorghum may need sterile males; plant breeding experiments …

… a photosynthetic microalgae, and a little-characterized microbiome. When warm waters stress corals, it might be …

… more to come in 2020. Researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley … published January 27, is about engineering plants and their microbiomes for more sustainable agriculture and was written …

… Rainforests store a big fraction of all the carbon on Earth, and soil microbes play a key role in pulling that carbon out of the atmosphere. This episode, researchers take a look at …

… Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address wide-ranging … Scientist at Lawrence Berkeley Laboratory, and Adjunct Professor at UC Berkeley. Dr. Pennacchio received his Ph.D in 1998 from the Department of Genetics at Stanford University where he uncovered the …

… chemical factories. They hold genetic blueprints for dozens of complex compounds, but stay largely dormant under … standard conditions. As described in a recent issue of mSystems , scientists found that adding salt to the growth … bioproducts. This study offers a template — integrative analysis of multiple omics data from various environments — …