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… Through the JGI-UC Merced Genomics Internship, graduate students Candace Cole, Mo Kaze, Akshay Paropkari, … Mo Kaze, UC Merced JGI Mentor : Susannah Tringe, Microbial Systems Group “Everyone here is very kind and really open to … helpfulness and patience of my JGI PIs, having lots of data to play around with.” …

… In this episode, undergraduates adopt genomes that the JGI sequenced, but never … write reports, and publish first-author papers, making the data available for future research. Hear from Rekha Seshadri (JGI) and Matt …

… Back in 2011, JGI-supported researchers published a paper in … metagenomics to identify over 27,000 microbial genes. The data from that study is now used across California State University campuses for biotechnology education …

…   Later this year, Ian Rambo, a graduate student in Brett … work was overseen by Susannah Tringe, head of the Microbial Systems group. He also worked with Simon Roux and David … the SCGSR research experience was “an ideal opportunity for me to get real-world experience.” As he finalizes his …

… For the first time, a team has comprehensively described host-virus dynamics in … relied on methods that eschew culturing, painting a more systematic picture through single-cell and metagenomic … of a virus relative to its host (inferred through sequence data) can suggest different predatory behaviors. A high …

… The latest edition of the JGI Progress Report highlights notable … is an image of Mono Lake, a saline soda lake east of California’s Yosemite National Park, taken by JGI’s own Jon … by the JGI (isolates here , here and here ), and the data has been used to better understand arsenic mobility and …

… The BioSANS instrument is at the Center for Structural Molecular Biology (CSMB) at Oak … instrument when applying to the FY2022 EMSL-JGI FICUS call for proposals. Presentations from: Scott Lea, EMSL’s … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …

…   To understand virus-host dynamics, computation helps fill in what … more of these viruses than ever before, in all kinds of ecosystems. However, matching these viral genetic sequences to … used 1,870 known virus-host pairs to generate a matrix of data points.  Applied to 216,015 high-quality virus …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … which could then be converted into sustainable biofuels . For its importance to the DOE mission, switchgrass is among … switchgrass genome sequence is available on the JGI plant data portal Phytozome. The combination of field data and …

… This is the third and final episode of our series on a giant metagenome assembly from Wisconsin’s Lake Mendota. … get these specialized snapshots of a freshwater ecosystem. …

… Committee (UEC) recently welcomed three new members earlier this month – Sneha Couvilion of Pacific Northwest … and Elizabeth “Lizzy” Wilbanks of the University of California, Santa Barbara. They join eight other JGI users … Society of America and is also a National Microbiome Data Collaborative (NMDC) Champion. As an early career …