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JGI User Executive Committee Expands
… of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). They are: Ivan Baxter of the … Center, Sundy Maurice of the University of Oslo, Aaron Robinson of Los Alamos National Laboratory, Rebecca Smith … Research Centers. Sogin is a microbial ecologist at UC Merced, where her group focuses on the interactions …
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Ben Bowen
… spectrometry-centered projects, Dr. Bowen’s work focuses on developing high-performance computing workflows and … for advanced analysis, modeling, and data integration. Dr. Bowen’s expertise in spectral alignment, molecular … Lab Director’s Award for Exceptional Achievement 2012 UC Berkeley, Leadership and Development Program Awardee …
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JGI Accepts 17 Proposals for Community Science Program
Monitoring Inter-Organism Interactions Within Ecosystems … to developing sustainable resources for biofuels and bioproducts. Andrew Nelson of the Boyce Thompson Institute at … collaboration that produced the reference genome sequence for Eucalyptus grandis. Accessing recently burned …
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Nigel Mouncey
… private sector, as well as research expertise in secondary metabolites and synthetic biology. Dr. Mouncey has a long-standing interest in microbial genetics that started with his education and carried forward into his roles as a senior …
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Ray Turner Completes Last Tour of Lab Duty at JGI
For the last 15 years, Ray Turner has been one constant for the Joint Genome Institute. On July 1, 2020, … While the virtual mic shifted to Ray for his introduction to his successor, Nick Everson, there was a knock at …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
For many scientists, the culmination of their work into a written report that is published in … Wint, an alumna of the DOE Joint Genome Institute (JGI)-UC Merced internship program and current PhD student, … applications, Wint also developed and tested a gene sequence-based predictor of gene expression levels using …
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A Complex Confection Decoded: Sugarcane Reference Genome
… work toward advancing sugarcane biotechnology. The Science Considered the world’s most harvested crop by tonnage, sugarcane accounts for 80% of global sugar production. A reference genome for the sugarcane cultivar R570 … Community Science Program; in 2018, a monoploid reference sequence of sugarcane was published as a step forward in …
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10 From JGI on the 2019 Highly Cited Researchers List
Clarivate Analytics, formerly the IP & Science arm of Thomson Reuters, has released their 2019 list of Highly Cited … Plant & Animal Science category Plant Program Library Construction Group Lead Jane Grimwood (at HudsonAlpha), … Nature Genetics, the work is part of a long-term project to sequence, annotate and analyze the genomes of more than 300 …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… deep subsurface ecosystem. The Science Altiarchaea are carbon-fixing microbes and targets of multiple viruses in … The battle waged below the Earth’s surface is reconstructed by combining a study of microbial communities … at virus infections. Their genomes include short DNA sequences that code for CRISPR systems, which help bacteria …
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Computationally Classifying Fungal Lifestyles
Machine learning methods were applied on sequenced fungal genomes to classify gene families. The … major food crops and feedstocks for biomass and biofuel production. Learning about the ecology and evolution of  …
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Trent Northen
… programs using mass spectrometry for energy and environmental research, including through the Joint BioEnergy … available to JGI users.  Dr. Northen’s research is focused on using metabolomics to link genomes with environments to … in Metabolomics, The Scripps Research Institute Executive Education, UC Berkeley Haas School of Business DOE Oppenheimer …
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JGI Workshop at SIMB NP Meeting
Jan. 7: New Capabilities to Study Secondary Metabolism   Although there are still a large number … expressing a given BGC in various hosts, availability of sequenced genomes, and computing resources needed to predict BGCs from available genome sequences. The DOE Joint Genome Institute (JGI), a DOE …
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