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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
Emerald Nash and mentor Jonelle Basso, Experimental Study of Root Colonization by Resident Phages of a Plant Growth Promoting Rhizobacterium Graduate Interns …
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JGI announces second round of 2023 New Investigator awardees
… is eager to work and share our tools with a widening circle of researchers. That’s why twice each year we look for novel … under our Community Science Program .  Below find a list of the second round of researchers accepted for 2023. Proposals are accepted …
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Computationally Classifying Fungal Lifestyles
… genomes to classify gene families. The Science As a proof of concept, researchers developed an algorithm that … nutrients from decaying organic matter (saprobes), and many plant pathogens known to infect most major food crops and … genome data from newly sequenced genomes, they also built a high-quality phylogenetic tree for  Dothideomycetes . The …
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An Automated Tool for Assessing Virus Data Quality
… (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a … from metagenomes is challenging and often results in highly fragmented data, which limits the ability of … who encounter an elephant for the first time. Based on the single body part each blind man touches – a tusk, the ear, …
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Better Genome Editing for Bioenergy
… oil production. The Science CRISPR-Cas9 is a powerful, high-throughput gene-editing tool that can help scientists … bp) that directs the endonuclease where to cut, but these “single guide” RNAs (sgRNAs) can be faulty. Without a good …
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JGIota: Looking Back at Methane-Making Microbes
… from gut microbes — the bacteria and archaea breaking down plant matter. So since 2010, the JGI has supported …
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A Step Toward Controlling Soybean Rust
… causes Asian Soybean Rust (ASR) and is the major pathogen of soybean. Left uncontrolled, soybean rust could reduce … characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… and relevance to the DOE’s mission.  Have someone proofread your proposal to make sure the goals, experimental … characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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A One-Stop Shop for Analyzing Algal Genomes
… data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place where you can browse the … analysis of fungal genomes, and Phytozome for comparing plant genomes. Kuo and Grigoriev encourage scientists to …
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Webinar: Introducing the BioSANS capability
… on “Integrated Multi-omics Analyses for the Prediction of Metabolic Flux in. Lignin Conversion”       … The U.S. … characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Microbiome Data Science: Understanding Our Microbial Planet
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… 2023 marked a decade since the inception of the flagship internship program between the DOE Joint … the JGI’s home at Berkeley Lab, as representatives highlighted the benefits of this collaboration.  JGI … After working on his post-doctoral position with the Plant and Microbe Interaction group at Oak Ridge National …
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