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UC Merced Interns Reflect on Their JGI Summer Projects
Over the course of eight weeks this past summer, 10 students from UC Merced worked closely with … develop presentation skills as well as build their network in the field of genomics and scientific research. The topics … more about their work here in a series of videos produced by JGI Communications & Outreach intern Ashleigh Papp. The …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
In the summer of 2015, Adam Session was a postdoc working at the DOE Joint Genome Institute with … genome duplication occurs within a single species. By contrast, “allopolyploids” arise when different ancestral …
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JGI-UC Merced Interns Share Their 2021 Experiences
During the summer of 2021, 13 interns from UC Merced spent … activities. For some students in the 2021 cohort, this was their first internship experience, while others further … P. hallii Mutant Library … Evaluation of Binning Tools for Microbial Eukaryotes in Metagenomes … Functional exploration …
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2024 Progress Report
The Integrative Genomics Building (IGB) seen above is home to … (JGI). Researchers from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative … processed 13,700 metabolomics samples With our users, 247 publications were published   … Our primary objective is to …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great … with the HudsonAlpha Institute for Biotechnology. Publications Grimwood, J., Gordon, L., Olsen, A. et al. The …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
Team develops a computational pipeline to sift and characterize RNA virus sequences.  A zoo … samples around the world, resulting in a five-fold increase of RNA virus diversity. “The world of viruses around us … metatranscriptome datasets from the JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) system. “We then …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… 2023 marked a decade since the inception of the flagship internship program … Merced. What started with 2 interns in the summer of 2014 has grown to a total of 75 with the inclusion of the 2023 … relevant are service and respect, and I live these values by being able to pass along my knowledge to them as best as …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
As part of the JGI’s 25th anniversary celebration, the 2022 Annual Meeting featured speakers who shared a look back at the JGI’s … manager in 2006 when the JGI transitioned from human to microbial genetics. Drell held the role until he retired in …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
In this short video, UC Merced undergraduate and graduate students share how their summer internship experiences have influenced their careers in … mentors  Zhong Wang and Bryce Foster Sivagunalan Thamilarasan and mentors Zhong Wang and Bryce Foster Feng Yu and … and I look forward to keeping them in my network.      Byline: Ashleigh Papp …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, JGI’s Zhong Wang and … Visel teamed with University of California (UC), Merced assistant professor Suzanne Sindi from the School of Natural … Ben Cole, a project scientist in Visel’s Genomics of Plant-Microbial Interactions Group who has mentored several of the …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
For the first time in several years, the DOE Joint Genome Institute hosted several UC Merced students this past summer. This year’s cohort for the JGI-UC Merced … Jonelle Basso, Experimental Study of Root Colonization by Resident Phages of a Plant Growth Promoting …
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Kjiersten Fagnan
Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, after … … About the JGI Chief Informatics Officer … Selected Publications … Awards and Honors …
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