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… data set will help identify how different elements of the ecosystem interact and respond to changes in the … their genetic diversity. They hold economic value as both biofuel feedstock and their role in carbon sequestration. … generated is 25 terabytes in size. Resources for genomic sequencing, analysis and characterization were provided by …

In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … reference genome built off more than a decade of work; as sequencing technologies advanced, assembly and annotation of …

… (CSP) . This includes mass spectrometry-based measurements of primary and secondary metabolites from plants, … The JGI is not a funding organization. Rather, it makes its sequencing, synthesis, metabolomics and data analyses … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …

… is not exclusively for Euryarchaeota. Atmospheric levels of methane, a potent greenhouse gas, regulate Earth’s … methanogens were, but they were discovered by genome sequencing, which is a much less biased approach to studying … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …

National Laboratory where he focused on functional genomics of phototrophs. Through this and post-doctoral positions at University of Florida and UCLA he has worked with a wide range of … algae, archaea and bacteria with a view to developing a deeper understanding of sequence-based gene function. … …

In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both … Audio Two special days occur in April: the 50th celebration of Earth Day on April 22, and DNA Day on April 25. Since … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …

PCE (perchloroethylene) found its way into the groundwater of several communities in New Mexico via leakage from a … down PCE into the chemical compound ethene. Applying genome sequencing and analysis, the researchers identified other … amount of what’s allowed in drinking water. However, in the deeper sites, toxic chemicals remain.  To identify the …

… . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to … N. crassa is the model organism for filamentous fungi, all of which contain a wide array of plant cell-wall degrading … and optimized by Ronan O’Malley, who leads the JGI’s Sequencing Technologies group. DAP-seq allowed the team to …

Ancient  Chloroflexota s ditched their flagella and other traits when … Chloroflexota lost when they returned to an ocean home. A deeper understanding of how these bacteria evolved could … organisms to swim around. However, genome and metagenomic sequencing conducted by the U.S. Department of Energy Joint …

… most harvested crop by tonnage, sugarcane accounts for 80% of global sugar production. A reference genome for the … by an international consortium. With the genetic code of sugarcane, researchers were able to map the location of … sugarcane was published as a step forward in this effort. Sequencing and assembling the genome required a custom …

… ice in the Arctic has decreased by more than 30% in terms of quantity and thickness. Replacing older, thicker ice with … surface where algae grow. Armed with a better understanding of the alga’s stress resistance and ability to adapt to … This was facilitated in part by RNA library preparation and sequencing from the U.S. Department of Energy (DOE) Joint …

Tanja Woyke , who has been elected to the American Academy of Microbiology (AAM) ! She is among the 68 new Fellows in the Class of 2020, selected from 118 nominees. The selection process … One example, published in Nature , applied single-cell sequencing to decode genomes of bacteria and archaea from …