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Mapping the Burkholderia cenocepacia niche response via high-throughput sequencing
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Rapid whole-genome mutational profiling using next-generation sequencing technologies
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Anchoring and ordering NGS contig assemblies by population sequencing (POPSEQ)
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DNA Sequence Analysis of an Inversion Hot Spot in Lobeliaceae Plastomes
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Fungal diversity and function in metagenomes sequenced from extreme environments
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Connecting chemical and protein sequence space to predict biocatalytic reactions
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JGI announces 2023 CSP Functional Genomics awardees
…   Each year, the JGI accepts proposals for state-of-the-art functional genomics research from potential users … and omics capabilities to enhance understanding of gene and genome function.  Below find a list of the six researchers accepted for 2023. Proposals are accepted year-round; the next deadline …
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JGI announces 2025 Functional Genomics awardees
… Woolston. ] Each year, the JGI accepts proposals for state-of-the-art functional genomics research from scientists who … and omics capabilities to enhance understanding of gene and genome function. Tapping into these functions allows … Below find a list of the 11 researchers accepted for 2025.  Proposals are accepted year-round ; the next deadline …
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Evolution of a Fungal Gene Expression Regulator
… Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. The Science Changing an A, C, T or G in a genome sequence can lead to changes in protein structures and … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is …
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Complete genome sequence of the termite hindgut bacterium Spirochaeta coccoides type strain (SPN1T), reclassification in the genus Sphaerochaeta as Sphaerochaeta coccoides comb. nov. and emendations of the family Spirochaetaceae and the genus
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An Automated Tool for Assessing Virus Data Quality
… CheckV can help researchers assess virus sequence fragments and data quality. The Science Through … recovered and identified from environmental samples (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a …
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JGI Early Career Researchers Featured in mSystems Special Issue
… In a special issue of mSystems , out May 14, 2019, JGI researchers are among … Micro-Scale Applications head Rex Malmstrom and Metagenome Program head Emiley Eloe-Fadrosh outline more … recent Nature Communications paper, uncovering giant virus sequences in soil for the first time. A second approach …
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