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JGI Welcomes New UEC Members
… and career stages. The election period concluded on October 21. The results are in and JGI extends a warm welcome to the … who represent the scientific areas of plant genomics, DNA synthesis and metabolomics, …
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Len Pennacchio
… In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute … 2021-  NLM Board of Regents Working Group on “NIH Comparative Genomics Resource” 2021-  Co-Chair, “Advances in Genome Biology & Technology- … Complete Publications Genomic Technologies Program Defining the vast …
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The JGI Data Portal: Improving User Experience
… Portal , a pilot download experience accessible from JGI’s plant portal Phytozome . Although the Data Portal is … areas of focus and data and computational needs. Over its 23-year history, JGI has produced more than 13 petabytes of … all the data associated with the latest version of the plant portal, weren’t able to complete this task. Improving …
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DAS Tool for Genome Reconstruction from Metagenomes
… functions in processes ranging from nutrient cycling to plant health and growth. Developing a scalable computational … of the Emerging Technologies Opportunity Program in 2013, a team of researchers has been working on improving … by the Banfield lab in collaboration with the JGI), human microbiomes, natural oil seeps in Santa Barbara, Calif., and …
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Host population diversity as a driver of viral infection cycle in wild populations of green sulfur bacteria with long standing virus-host interactions
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H2-saturation of high affinity H2-oxidizing bacteria alters the ecological niche of soil microorganisms unevenly among taxonomic groups
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Synergistic interactions between anammox and dissimilatory nitrate reducing bacteria sustains reactor performance across variable nitrogen loading ratios
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Scaling Up Existing Skill Sets
… internship opportunities in fields ranging from plant-microbe interactions to functional genomics. Hear from five of the Summer 2019 interns, who briefly shared their experiences below. … in Quantitative and Systems Biology Mentor: Guohong Wu, Plant Comparative Analysis What effect has your summer …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… In the summer of 2015, Adam Session was a postdoc working at the DOE Joint … organisms may evolve.  Determining the genetic codes of plants is often challenging because in many plants chromosomes are present in more than two copies, a …
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JGI Announces 2023 Community Science Program Awardees
… to the proposers of the 19 proposals selected for the 2023 Community Science Program call of the U.S. Department of … CSP call had five areas of emphasis: genes to function, plant and algal functional genomics, inter-organismal …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
… Every year, the JGI sequences around 35,000 samples — from plants, algae, bacteria, archaea, fungi, viruses — to …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… [DNA Synthesis Science Head] Yasuo [Yoshikuni] gave back in 2016.” Alper’s first approved JGI proposal came through the … development and its applications. “I moved to UC Davis in 2014,” recalled Philipp Zerbe of the University of … The consortium looked at how different bioenergy relevant plants can produce species-specific blends of terpenoids, …
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