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Nikos Kyrpides
… Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program and the development … Microbial Genomes and Metagenomes Program since 2011. Prior to joining the DOE Joint Genome Institute, Dr. Kyrpides led … BA in Biology, Aristotle University of Thessaloniki, Greece PhD in Molecular …
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High-quality draft genome sequence of Flavobacterium suncheonense GH29-5T (DSM 17707T) isolated from greenhouse soil in South Korea, and emended description of Flavobacterium suncheonense GH29-5T
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Draft genome sequences of Arthrobacter sp. AZCC_0090 and Mycobacterium sp. AZCC_0083 isolated from oligotrophic subsurface forest soil in the Santa Catalina mountains of Southern Arizona
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Whole Genome Analyses Suggests that Burkholderia sensu lato Contains Two Additional Novel Genera (Mycetohabitans gen. nov., and Trinickia gen. nov.): Implications for the Evolution of Diazotrophy and Nodulation in the Burkholderiaceae
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An Addiction Crucial to a Fungus’ Reproduction
… A fungus relies on bacteria to regulate key components of its reproductive machinery The … as a mutualist, where both species of organism benefit from association, but was predicted to have evolved from a … control over reproduction was a likely key to this evolutionary transition. Using this model, researchers also …
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JGI@25: The Little Alga That Could
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … and Sabeeha Merchant of UCLA. Merchant is now at UC Berkeley and also a faculty scientist in the Berkeley Lab … sort of genomic hackathon to annotate a genome. (Hear more from on Chlamy from Sabeeha Merchant in this episode of …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… are abundant and yet exceptionally small, with mini genomes to match. As a result, they cannot process all of the … Horonobe Underground Research Laboratory, Hokkaido, Japan. From samples of both environments, they used fluorescence  … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), as well as …
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Secrets of the Needles: What Microbes do on Conifer Leaves
… of conifers–limber pine, Douglas fir and Engelmann spruce–to learn more about conifer needle microbiomes. The survey … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), is of … summer project in the JGI-UC Merced Internship Program. In 2023, Shayna Bennett, a UC Merced graduate student in …
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Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-rich mining site soil
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Soil virus offers insight into maintaining microorganisms
… portal, researchers have identified a virus protein tied to carbon cycling.  The Science Through a collaborative … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). Using 5,000 … of genetic diversity and capable of transferring genes from one host microbe to another, which can have a …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… A new view into a symbiosis could offer benefits to address climate … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). Specific … as a reservoir for carbon compounds that plants generate from carbon dioxide they take in. In this way, encouraging …
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Improving the Cacao Genome and Phytozome
… Global chocolate brands can’t exist without cocoa According to the  International Cocoa Organization (ICCO), global cocoa bean production in 2017-2018  was 4.6 million metric tons . The global … by HudsonAlpha scientists, with the help of funding from Mars Wrigley. The annotated genome has been updated to …
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