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New Research Sheds Light on Diversity in the Deep Sea
… Microbial communities living near hydrothermal deep-sea vents hold … array of microorganisms adapted to living in extreme conditions. At these vents, and underwater volcanoes,  … communities across five oceanic regions. In doing so, they found a high degree of variability in the types of …
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BLINK enables ultrafast tandem mass spectrometry cosine similarity scoring
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Conservation of Endophyte Bacterial Community Structure Across Two Panicum Grass Species
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… JGI researchers nearly tripled the available fungal mitochondrial genome data, unlocking new potential for AI-driven … new annotations of fungal mitochondrial genomes — the DNA found inside mitochondria, the energy-producing structures … — supporting the notion that the boundary between these two genomes is not fixed, but continues to shift through …
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Integration of phenotypic metadata and protein similarity in Archaea using a spectral bipartitioning approach
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A tale of two codes
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Identifying the Microbial Cleanup Crew at a Superfund Site
… Analysis reveals the microbial community involved in a bioremediation effort. The … found its way into the groundwater of several communities in New Mexico via leakage from a local … require cleanup and long-term monitoring. The DOE has been similarly invested in environmental management, contributing …
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Metagenomes from two microbial consortia associated with Santa Barbara seep oil
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Luteibacter mycovicinus sp. nov., a yellow-pigmented gammaproteobacterium found as an endohyphal symbiont of endophytic Ascomycota
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Analyze Data
… can empower the global research community.   We have two key priorities:  The JGI is involved in efforts to integrate data in support of new research questions that span domains. We also work with our partners to … July 22–July 24 for computing upgrades . We regret any inconvenience. …
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A Community Resource for Secondary Metabolite Researchers
… The Secondary Metabolism Collaboratory encourages user engagement. … more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence … a secondary metabolites portal within the Integrated Microbial Genomes and Microbiomes (IMG/M) system known as …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial mats, communities of microorganisms live among viruses that infect … then allowed the team to ask, for the 34 hosts they found, how prevalent in the mat are their viruses? The …
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