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… (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) Project through a 2012 Community Science … “We currently have 19 genomes sequenced, 15 that are in sequencing or assembly right now, and eight more that we are … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …

… Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a broader … builds upon several papers and workshops, starting with the first mycorrhizal genome sequence generated by the JGI more …

… automations for DNA design, assembly and analysis Overview of biodesign products The JGI Biodesign platform enables … constructs that can then be functionally characterized.    We provide custom DNA constructs:  Individually arrayed … BOOST provides a suite of tools to automate sequence design for assembly by Gibson, …

… . The Science Most species are diploids and have two sets of chromosomes, one from each parent. In contrast, many … of chromosomes (they are “polyploid”) and their complex genomes are more difficult to sequence and assemble, in turn … genomic breeding in these crops. For diploid species, sequencing programs generally focus on a genotype with two …

… the pharmaceutical industry. He holds joint appointments as Fungal and Algal Program Head at the JGI, a Senior Scientist … at Lawrence Berkeley National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of … and led annotation and analysis of diverse eukaryotic genomes, from protists to plants. In 2009, he launched the …

… new technology development and JGI user science projects. We perform analysis for diverse experiment types, with main … epigenomics. Our work varies in scope from the development of highly customized analysis workflows for new product … development of automated analysis pipelines for standard sequencing products performed at scale. Our group also …

… plant host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with … other plant-associated fungi. Their analysis identified fungal gene families that help determine if these fungi act … The sequencing project was funded by the U.S. Department of …

… Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for … ,  Science Focus Areas  (SFA) opportunities, and the  Office of Science Early Career Research Program .   If …  should fill out this form . Please allow a minimum of  two weeks for your request to be processed. Investigators …

… darwinii are the others. All of these cotton lineages have genomes approximately 2.3 billion bases or Gigabases (Gb) in … their genomes were “remarkably” stable. “We thought we were sequencing the same genome multiple times,” Schmutz … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton …

… design to reuse. Armed with the high-quality data we generate, tools like artificial intelligence can empower the global research community.   We have two key priorities:  The JGI is involved in efforts to integrate data in support of new research questions that span domains. We also work …

… Novel study looks at microbiomes in aerial surfaces of plants and their roles in plant health and environmental … 1000km section of the Rocky Mountains. This represents the first study of this nature.  The phyllosphere is a major … analysis of mobile genetic elements across all of the metagenomes. Learn more about her time at the JGI here . Bennett …

… really fully exist back then,” said Hal Alper, a University of Texas at Austin professor, “but we really first heard about the JGI synthesis grant during a … Collaborations for User Science” (FICUS) initiative .  Q: What is the difference between “regular” proposal and a …