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A One-Stop Shop for Analyzing Algal Genomes
… genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place where you can … evolutionary diversity, algal genomes can be incredibly complex and difficult to sequence and understand. A team of … supported in part by the Bioenergy Technology Office within the U.S. Department of Energy’s Office of Energy …
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Constructing a yeast to express the largest cellulosome complex on the cell surface
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Effects of Polar Light Cycle on Microbial Food Web
Populations of Antarctic lake microbial communities change with the seasons. The Science … researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … by the JGI’s Community Science Program. For most months each year, Ace Lake is covered in thick ice, with a …
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High-resolution metagenomics targets specific functional types in complex microbial communities
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JGI@25: Using Team Science to Build Communities Around Data
… (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) Project through a 2012 Community Science … proposal collaborators, 58 had never shared a proposal with each other prior to their involvement with the 1KFG project. … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial mats, communities of … lysogeny, they can insinuate themselves inside the host’s genome, living quietly and replicating with their host … an estimated 40 to 80 percent of all the microbial cells on Earth. As microbial predators, viruses are able to …
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Co-occurrence networks reveal more complexity than community composition in resistance and resilience of microbial communities
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Plotting a Model for Virus-Host Warfare Deep Below Ground
…   Visualizing a novel, candidate viral genome found in the deep subsurface ecosystem. The Science … nitrogen, but the viruses that infect Altiarchaea cause the cells to burst. This action triggers subsurface carbon … then burst, spreading the virions out and moving the carbon within the microbial community. These findings also suggest …
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Frequently Asked Questions: Proposal Submission
… proposals are subject to JGI policies on Data Release and Publication .   Except for applicants to the CSP New … on our YouTube channel as well as in this episode of our Genome Insider podcast.  You can also contact … range from raw sequence data to well-annotated assembled genomes to synthesized DNA constructs to metabolomics data, …
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Taking Stock of the Known and Unknown Microbial Space
Metagenomic datasets could help map out microbial diversity hotspots Over the past few decades, … technologies have led to an abundance of microbial genomes becoming available to the global research … Dongying Wu, a member of the Functional Annotation team within the JGI’s Microbiome Data Science group. “Turns out …
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Optofluidic Raman-activated cell sorting for targeted genome retrieval or cultivation of microbial cells with specific functions
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