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A Community Resource for Secondary Metabolite Researchers
… user engagement. The Science In addition to the core set of "primary metabolites"—chemical compounds shared by most … more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence … and viral BGC sequences. Expansion of the SMC to include fungal, plant, viral, and metagenome data is currently …
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Natural Prodcast Episode 1: The Primer, Part 1
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … research, and also to talk to the wider natural products community about what they need to advance their science, and … where this happened have a tendency to be susceptible to a fungal infection of rye grain – a specific fungus, Claviceps …
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Sphagnum physiology and changing climate
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Evolution of a Fungal Gene Expression Regulator
… Describing the largest analysis to date of the modified DNA base … on the largest analysis of 5mC distribution across the fungal tree of life to date, involving more than 500 species … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science …
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Diversity of active viral infections within the Sphagnum microbiome
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Homepage
…   Gain access to omics technologies generating community data at zero cost —  submit a proposal.  … Our homepage video includes external footage from: University of Delaware; Laura.Selbmann©PNRA. All the sampling …
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Large-scale genomic analyses with machine learning uncover predictive patterns associated with fungal phytopathogenic lifestyles and traits
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… influence in their chosen field or fields through the publication of multiple highly cited papers during the last decade” by … as well as a Nature Plants study identifying colonization patterns in eelgrass . Igor Grigoriev’s recent work includes …
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Sequencing Technologies & Products
…   Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of sequencing capabilities and products to our users. This … An assay used for profiling transcription factor binding sites across entire … The JGI uniquely offers quantitative Stable Isotope Probing (SIP) …
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Secrets of the Needles: What Microbes do on Conifer Leaves
… Novel study looks at microbiomes in aerial surfaces of plants and their roles in plant health and environmental … leaf surface. More specifically, they found that microbial community composition and functional potential varied across tree species and sites, reflecting ecological patterns shaped by both local conditions and the movement of …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a … effective in organizing, training and deploying hundreds of community members in their neighborhoods and nearby forests …
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Patterns in Wetland Microbial Community Composition and Functional Gene Repertoire Associated with Methane Emissions
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