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Enabling pan-repository reanalysis for big data science of public metabolomics data
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… bacteria function and colonize diverse environments. The Science Cyclic di-GMP (Guanine Monophosphate) is found in … functions. It plays an important role in regulating microbial cellulose production and biofilm formation, which … within the Nano-lantern scaffold. They then mined sequence databases for homologous YcgR proteins and chose a set of 92 …
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User Programs
… research interests that integrate genomics with nanoscale science in the area of critical minerals and materials. …   Learn more about our individual calls and other opportunities to work with …
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Biodesign
… team has three subgroups: Synthetic Biology Lab : a user science group dedicated to user project design, assembly, … Synthetic Biology Informatics Group : a team that develops data science tools for workflow management and novel … users to validate hypotheses generated from mining genomic data by designing and assembling physical DNA constructs …
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Secondary Metabolites Program
… The program works to uncover these hidden biochemical resources by exploring the genetic pathways responsible for … bioactive secondary metabolite compounds. To support users, our efforts include developing computational tools for … cell- and cell free-based expression platforms, tools and data for deciphering regulatory networks, and refining …
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CalTeach
… for undergraduate majors interested in developing a deep understanding of STEM teaching & learning. Their coursework focuses on STEM pedagogy, educational theory and … and tutoring centers. Cal Teach offers a minor in Science and Math Education, as well as a unique opportunity …
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The JGI announces FY25 awardees for our Community Science Program Annual Call
… JGI is excited to announce the 18 scientists selected for our 2025 Community Science Program Annual Call. These projects include cutting-edge research into microbial communities — from freshwater estuaries reshaped …
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A roadmap for equitable reuse of public microbiome data
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The JGI announces 2024 awardees for our Community Science Program annual call
… is excited to announce the fifteen scientists selected for our 2024 Community Science Program Annual Call. “It’s exciting to see the … The annual CSP call is focused on large-scale genomic science projects relevant to the DOE’s Office of Biological …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… provide insights into environmental tendencies The Science The  Metagenome Stability Diagram — a tool within the Integrated Microbial Genomes and Microbiomes (IMG/M) platform — has been developed to help … Neighbor (KNN) Classification. LDA is a supervised data compression technique that was used to take the …
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Partnerships: Myco-Ed
… Curriculum for Education and Discovery  (Myco-Ed) is a Course-Based Undergraduate Research Experience (CURE) that … train students and professors in laboratory techniques and data analyses compile original data for improving fungal genomic resources empower students …
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FICUS-NERSC/KBASE
… is to accelerate scientific discovery at the DOE Office of Science through high performance computing (HPC) and data analysis.  The DOE Systems Biology Knowledgebase ( KBase ) integrates systems biology data and tools to help predict biological function.   To …
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