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… The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to … accepted proposals, sequencing, synthesis, metabolomics and analysis will be provided for free to the PI by the … All proposals will be externally peer-reviewed for …

… Journal publication caps JGI pilot project with fledgling Florida … the microbes that play roles in the methane cycle. Their data report, which provides the only known reference … metagenome assembly, and even an introduction to data analysis using the  IMG/M system . A Comprehensive Learning …

… The human-centered, agile collaboration between the JGI and the … technology company Truss has resulted in the JGI Data Portal , a pilot download experience accessible from … work on IMG and GOLD,” said Steve Wilson, head of the JGI’s Systems Engineering Group. “Our team’s ultimate goal is to …

… This webinar focused on how the JGI employs single-molecule, long-read … DNA sequences to aid with genome assembly and transcriptome analysis of microbial, fungal, and plant research projects.  … sequenced without pooling, which yields ~ 180 Gb of data per library. Q: How much DNA/coverage is required for …

… A deep dive into microbial genomics reveals one bacterial … cells of the uncultivated SAR324. The constellation of data gave the team unprecedented resolution to study the … the JGI Integrated Microbial Genomes & Microbiomes (IMG/M) system . By analyzing the metagenomes, metatranscriptomes …

… JGI Mission As a U.S. Department of Energy Office of Science user … provide advanced genomic capabilities, large-scale AI-ready data and professional expertise to support the global … in studies of complex biological and environmental systems. We optimize our service to the community through …

… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is … of genomics through open access to resources and promoting data sharing to accelerate discovery and maximize the … are requested to be held until a specified date, or the publication date, whichever comes first. For nearly 40 …

… DAN: You’re listening to the US. .Department of Energy Joint … to unpack experimentally. But there’s a couple of different systems where people have made strides in that area. Where I … for a company. Personally, that was my first taste of big data if you want, maybe it’s medium data now. But at the …

… Analysis reveals the microbial community involved in a … The DOE has been similarly invested in environmental management, contributing to bioremediation efforts for … , they were able to analyze the resulting metagenomic data. (Data from the project are available on the  JGI …

… When the JGI Data Portal (https://data.jgi.doe.gov/) launched last year, … requires that users know about the FY Funding Year, and the publication status in addition to the public/private status. … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …

… As SIP experiments shed more light on microbial communities … — JGI researchers and collaborators work to create FAIR datasets to maximize returns on these advances. Over the … a  few years ago, researchers can request quantitative SIP analysis as a capability in proposal calls to the U.S. …