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Thousands of small, novel genes predicted in global phage genomes
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A Sorghum Pangenome Opens More Doors to Discovery
… Leveraging decades of technological development, dozens of … sequence for a line of sorghum, reference genomes have generated insight into drought tolerance, biomass production … Development (USAID) also supported the work.   Publication:  Morris, G.P., Harder, A.M., Healey, A.L.  et …
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Community Science Program
… The Community Science Program (CSP) provides the scientific community at large with access to high-throughput sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  … more customized analysis, the JGI also participates in publication of results. See more details on our Review …
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A pipeline for targeted metagenomics of environmental bacteria
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Tour the IGB
… Take a virtual tour of the IGB, home of the DOE Joint Genome … the frontiers of environmental and energy genomics.  For more information about the science depicted, click here . …
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Proteomics for Validation of Automated Gene Model Predictions
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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new capabilities and resources to users … biology. The collaborations present exciting possibilities for scientific exploration, granting access to diverse … Through its partnership with NERSC and the DOE Energy Sciences Network …
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Rex Malmstrom
… Dr. Malmstrom is a Staff Scientist and leader of the Microscale … isolating individual bacterial cells and amplifying their genetic material, thus bypassing the need to culture these … group to operate a similar single-cell genomics pipeline that provides JGI users access to the genomes of …
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New and Improved: Eucalyptus Reference is Now Accessible
… An improved genome assembly to support targeted tree breeding for the bioeconomy.   The Science Researchers report a new … genome for eucalyptus in the July edition of the journal G3 Genes | Genomes | Genetics , with significant advances … The work (proposal: 10.46936/10.25585/60008105, WIP proposal ID: 508017, …
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Making a Lichen Together
… For the first time, a team analyzes the transcriptomes of a … For the first time, a team has analyzed in parallel the genomes and transcriptomes of both partners to better … and the microalga,  Asterochloris glomerata . To see how gene expression changes when living together versus apart, …
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Project Management Office
… The JGI Project Management Office carries out a number of activities to … help with: preparing a Statement of Work, completing a formal User Agreement, and ultimately launching the user’s project. See below for details on each step. … Please review our FAQ in advance of contacting the PMO office.  …
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Prodigal: prokaryotic gene recognition and translation initiation site identification
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