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Metagenomic Sequencing of Two Salton Sea Microbiomes
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
Every year, the JGI sequences around 35,000 samples — from plants, algae, bacteria, archaea, fungi, …
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Protein structure determination using metagenome sequence data
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Hi-C metagenome sequencing reveals soil phage–host interactions
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
As SIP experiments shed more light on microbial communities than ever before — especially with the prospect of meta-analyses boosted … this was the first workshop of its kind on SIP metagenomics,” Malmstrom said.  Increasingly, efforts like …
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Natural Prodcast Episode 9: Roger Linington
… … DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I … Yeah, that’s right. We were postdocs together in the mid 2000s, I guess. You were working for Brad Moore. I was … And that’s been followed by developments in pulse sequences and improvements in the ways in which you acquire …
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2025 NeLLi Symposium
Registration and Agenda Coming Soon!  Hosted by the DOE Joint … Immediately following the NeLLi Symposium, join us for a 1.5-day jamboree on November 6-7 focused on improving … Natarajan Google Olga Zhaxybayeva Dartmouth University … Metagenomic and single-cell sequence data have provided a …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
With a new methodology, scientists are now getting more complete … the  genomes of microorganisms is incredibly useful for understanding the microbiome of the earth, but most … , scientists usually employ two different methods; shotgun metagenomic sequencing and single-cell sequencing. For …
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A Community Resource for Secondary Metabolite Researchers
The Secondary Metabolism Collaboratory encourages user engagement. The … compounds shared by most living creatures for energy, growth and reproduction—most organisms produce a … more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence …
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iPHoP: A Matchmaker for Phages and their Hosts
…   To understand virus-host dynamics, computation helps fill in what … be a specific host the virus has adapted to commandeer. For bacteriophage viruses, these hosts are microbes like bacteria, not humans. With metagenomic sequencing, researchers have found more of these …
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Scaling metagenome sequence assembly with probabilistic de Bruijn graphs
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Fungal diversity and function in metagenomes sequenced from extreme environments
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