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Secrets of the Needles: What Microbes do on Conifer Leaves
… Novel study looks at microbiomes in aerial surfaces of plants and their roles in … first study of this nature.  The phyllosphere is a major habitat for plant-associated microbes at the interface between land and the atmosphere. Microbes living there can …
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Expansion of Thaumarchaeota habitat range is correlated with horizontal transfer of ATPase operons
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Webinar: MycoCosm Tutorial
… While are still working on finalizing the tree and related publication the tree is still in development and not … the sequence in the other strain portal? Like for example between Mucor CBS v2 and MU402 v1 (MU402 derives from CBS) … you mentioned they are filtered , what does/will this filtering entail? What features do you filter? remove/keep …
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JGI Hosts GPU Hackathon in May
… we will have available.” A maximum of six teams will be hosted at the Hackathon, with 1-2 mentors per team. …
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An Integrated Dataset to Understand Ecosystem Interaction
… and soil dataset for understanding the dynamic relationship between poplar trees and their microbial partners. The … and contribute to stabilizing streambanks, wildlife habitats and water-quality regulation. Focusing on the rhizosphere and interactions between the trees, microbes and soil chemistry offers …
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Examples: Successful LOIs & Submissions
… Elucidating Sphagnum microbiome genetic interactions for improved growth at …
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Tanja Woyke
… a gutless oligochaete for which she deciphered function and host-symbiont interplay using metagenomics. Taking on a Research Scientist … 20: 721 Nayfach et al. 2021. A genomic catalog of Earth’s microbiomes. Nature Biotechnology 39, 499-509. Schulz et al. 2020. Giant virus diversity and host interactions through global metagenomics. Nature 578, …
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Rhizosphere and detritusphere habitats modulate expression of soil N-cycling genes during plant development
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… , who was recently selected as the 2025 recipient of the Microbiome Data Prize by the American Society for … of the virus and plasmid workflows for the National Microbiome Data Collaborative.  This award recognizes … Prize also recognizes innovative and impactful analysis of microbiome data that has changed our understanding of the …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… influence in their chosen field or fields through the publication of multiple highly cited papers during the last … article detailing how forest floors, in particular the soil microbiome, recover post-wildfire . He and  Tringe were also … bioenergy feedstock, switchgrass has adapted to expand its habitat range —but at what cost?  Dan Rokshar  contributed …
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Unexpected host dependency of Antarctic Nanohaloarchaeota
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