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CSP New Investigator Call
… new to the JGI. Projects must be independent of ongoing JGI proposals, and lead PIs cannot have been lead PI on any previously accepted JGI CSP or FICUS proposal.   Competitive projects will provide pilot data to … proposal submission. Sequence requests should not exceed 3 Tb in total. Proposals for this call may be submitted at …
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CSP Functional Genomics
… the capabilities and expertise available at the JGI. Proposals to this call may be submitted to the JGI at any … web-based form and are reviewed annually. For accepted proposals, sequencing, synthesis, metabolomics and analysis … All proposals will be externally peer-reviewed for scientific …
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Work With the JGI! Tips for a Winning CSP Proposal
… to energy and the environment several times a year. A few proposal calls have deadlines coming up – in January, March, and later on in the spring. In this episode, hear proposal tips from Tanja Woyke, who runs user programs at the JGI, and project manager Miranda …
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Identifying Aspects of the Post-Transcriptional Program Governing the Proteome of the Green Alga Micromonas pusilla
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Natural Prodcast Episode 10: A Primer on Genome Mining
… Yu et al, APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2004, 1253–1262, 70:3 ALISON TAKEMURA: And so did you succeed in … bacteria, because it is so easy to sequence their genomes comparatively to especially plants. So yeah, so from there, … let us know. Find out more at https://jgi.doe.gov/user-programs . Thanks, and see you next time. …
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Mapping the Earth’s Hidden Fungal Kingdom
… Leveraging massive comparative genomics to decode millions of mystery genes and … has been evolving for 82 million years, making it nearly 30 times older than the entire human lineage. Yet despite … would be invisible when studying species in isolation. The comparative power has uncovered remarkable evolutionary …
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Who We Are
… download millions of files.  The vast majority of JGI proposals are supported under the auspices of our Community …
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JGI@25: Using Team Science to Build Communities Around Data
… at over 180 organizations in 29 U.S. states and 35 countries. (Graphic: Neil Byers) The JGI launched the … (1KFG) Project through a 2012 Community Science Program proposal. Joseph Spatafora of Oregon State University led … of Georgia, along with 100 of his colleagues in the comparative plant genomics community. The project’s aim is …
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Comparative Genomic Analysis of the Class Epsilonproteobacteria and Proposed Reclassification to Epsilonbacteraeota (phyl. nov.)
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Gamete expression of TALE class HD genes activates the diploid sporophyte program in Marchantia polymorpha
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Dan Rokhsar
… Program (2010-2019), and JGI Chief Informatics Officer (2013-2016). Dr. Rokhsar joined the faculty of University of … genome analysis, sequence-based genetic methods, and comparative developmental biology. In addition to this …
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From Competition to Cooperation
… across multiple fungal lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry … brown rot cannot break down the lignin but use cellulose. Finally, there are soil saprotrophs, which degrade plant … 62 mycorrhizal species. The 62 mycorrhizal species include 29 newly-sequenced mycorrhizal genomes. With so many fungal  …
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