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Metatranscriptomics sheds light on the links between the functional traits of fungal guilds and ecological processes in forest soil ecosystems
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … yet much of it remains unknown. For more than a decade, researchers around the world have collaborated with the U.S. … ( IMG/M ) portal. As part of a comparative analysis, 824 new GEBA-Actino genome sequences were combined with nearly …
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Microbial Program
The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis … high-quality, large-scale genomic data to advance microbial research that drives sustainable solutions in energy, … using advanced sequencing technologies to explore microbial diversity — with an emphasis on bacteria and archaea, and …
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Scientific Advisory Committee
The Scientific Advisory Committee (SAC) is a board convened by the JGI Director to provide a scientific and … technical input on large-scale production sequencing, new sequencing technologies, and related informatics; … from the DOE Office of Biological and Environmental Research (BER) program, set the final sequence allocation …
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Diversity and Distribution of Hydrocarbon-Degrading Genes in the Cold Seeps from the Mediterranean and Caspian Seas
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Institutional User Agreements
… — before any work can begin, including the submission of samples for sequencing, or the submission of … User Facilities, is a legally binding contract.   All User researchers must have their home/employing institution sign … address the DNA Synthesis program. When fully executed, the new User Agreement will replace the active version. For …
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At the Forefront of Terrestrial Virus Research
Gary Trubl is finishing his PhD in Microbiology at The Ohio State … Rich and Matthew Sullivan. He shared a few thoughts on his summer at JGI through a program that provides graduate thesis research opportunities at DOE laboratories.   …
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How to Submit Sequencing Samples
Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on … by accessing various reports on the JGI Portal . Use the search feature to bring up a list of projects that you are …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
Program was brimming with excitement and determination as they came onsite. From data carpentry to science … with Dr. Tomas Tyml and Dr. Frederik Schulz with the New Lineages of Life Group at JGI. And we’ve been working on … part about interning here is that I get to meet a lot of researchers that have been working on genomics data for a …
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A Community Resource for Secondary Metabolite Researchers
The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to the core set of "primary … in the recent Database issue of the journal Nucleic Acids Research , the Secondary Metabolism Collaboratory (SMC) has …
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Virus-Host Interactions and Genetic Diversity of Antarctic Sea Ice Bacteriophages
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… reveals unexpected complexity At first glance, the slightly murky waters in the tube look like a scoop of … National Laboratory (Berkeley Lab) and the Laboratory for Research in Complex Systems (LRC) in Menlo Park, Calif. In … DNA floats freely within the cytoplasm of their cells. This newly discovered species of bacteria keeps its DNA more …
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