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With collaborative user projects, the JGI’s Plant Program delves into the natural … challenges by exploring plants’ role in capturing carbon, detoxifying soils, interacting with other organisms, and … gene function research. The  Open Green Genomes (OGG) project seeks to develop comparative high quality genomes …

… tree and soil dataset for understanding the dynamic relationship between poplar trees and their microbial partners. … environment. The Impact Dubbed “the” bioenergy tree, poplars are known for their genetic diversity. They hold … (LANL), and DE-AC05-76RL01830 (PNNL). … BioScales project on JGI Genomes Online Database … BioScales project …

Database provides details on river microbes in 90% of US continental watersheds. The … are also available through the DOE Systems Biology Knowledgebase, allowing researchers to immediately explore and … anything. The collaborative consortium behind the GROWdb project demonstrates not only how researchers can …

Prodcast,” a podcast about the science and scientists of secondary metabolism.  Brad Moore, UC San Diego and Scripps … advisor.  Brad: Oh my goodness. Those were good years, Dan!  Dan: For too many years. Brad: And now look, … in his science. And he was working with some really cool projects at that time. So I was pretty stoked to be able to …

Machine learning methods were applied on sequenced fungal genomes to classify gene families. The … data generated in part through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The Impact … the fungal Tree of Life, including the 1000 Fungal Genomes Project, which aims to provide a reference genome for each …

With a background in experimental and computational surface physics, Dr. Goodstein held positions at … in support of JGI’s contributions to the Human Genome Project, he began developing larger comparative genomic … NY … RJ Craig et al., 2023.The Chlamydomonas Genome Project, version 6: Reference assemblies for mating-type …

As part of the JGI’s 25th anniversary celebration, the 2022 Annual Meeting featured speakers who shared a … from its beginnings in the sequencing for the Human Genome Project out to the future of the institution. Their talks … Lab. Like the mural, the JGI’s accomplishments over 25 years span a broad, colorful range. Behind every genomic …

Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley Lab’s) core values, which guide the relationships we nurture in our workplace and seek to establish … and practices that affect users and their science including technical capabilities offered, proposal review procedures …

… … DAN UDWARY: Hey, everyone! Welcome to the “Self Promotion Episode” of Natural … and too many others to name at JGI for the last two years or so. SMC is now released and ready for the public to … DAN UDWARY: Nothing to be sorry about. Yeah, no, your project was really cool. The vanadium haloperoxidases are …

The User Support Analysis group provides computational analysis for new technology development and JGI user science projects. We perform analysis for diverse experiment types, … Our group also performs ‘proof-of principle’ research projects to demonstrate new genomic capabilities. Our group …

Uncovering associations between plant roots and fungi that can help or harm … on the fungal Tree of Life through the 1000 Fungal Genomes Project. Hacquard’s group had assembled a mycobiome culture … genes that degrade plant cell walls and break down plant sugars. The results also revealed that the most beneficial …

… opportunities in fields ranging from plant-microbe interactions to functional genomics. Hear from five of the Summer … anyone in the Institute to get feedback and insights on the project and everyone’s willingness to guide or mentor me … one that incorporates big data. A large part of my project this summer was utilizing a high performance cluster …