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Plant-Microbial Interactions Group
… system. We seek to expand beyond this model system by identifying phages and characterizing this multipartite phenomenon … cross-sections. … 10.1038/s41579-020-0381-4 10.1038/s41396-020-0637-z 10.1038/s41477-024-01666-3 … 10.1073/pnas.1907500116 10.1016/j.celrep.2019.04.054 10.1371/journal.pbio.2002860 … Postdocs: Margot …
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Katherine Louie
… the JGI in 2014 to develop the metabolomics program, and in 2019 became Platform Lead where she manages metabolomics … analysis pipelines.  Beyond profiling over 10k samples/year, Dr. Louie and her team work with other JGI scientists … to assess metabolite turnover, DNA-SIP for helping identify active micro-organisms within complex communities, and …
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Kjiersten Fagnan
… workloads. Dr. Fagnan was appointed CIO of the JGI in 2016, and in 2018 was hired to be the JGI’s Data Science and … and Analysis, 2018, pp. 717-730, doi: 10.1109/SC.2018.00060. Wood-Charlson, E.M., Anubhav, Auberry, D. et al. The … Two-Phase Flow In Porous Media. Computational Geophysics 16(3). Dosanjh and S. Canon and J. DeSlippe and K. Fagnan and …
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Matt Blow
… and to understand genome function in bacteria. Since 2016, he has been the lead of the User Support Analysis group. … regulation. Nature methods 18 (12), 1499-1505 Shulse et al. 2019. Engineered Root Bacteria Release Plant-Available … of unknown function. Nature 557:503-509. Blow et al 2016. The Epigenomic Landscape of Prokaryotes. PLoS Genet …
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FICUS Overview
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Tanja Woyke Elected to American Academy of Microbiology
American Academy of Microbiology (AAM) ! She is among the 68 new Fellows in the Class of 2020, selected from 118 … Podar of Oak Ridge National Laboratory, who spoke at the 2019 New Lineages of Life (NeLLi) Meeting organized by the …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… 2022 marks the JGI’s 25th anniversary. Over the last year, we’ve been revisiting a number of notable achievements … kinds of supplies in the quest to break down plants.  In 2016, her team leveraged transcriptomics and other assays to identify and test carbohydrate-active enzymes. They found many …
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Workforce Development & Education Outreach
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Game On: High School Students Drive Everglades Metagenomics Study
… of 2018, Jonathan Benskin was preparing to teach a second year A-Level Advanced International Certificate of Education … used to map their routes had been taken. Sifting through 16 Trillion Bases of DNA Taking into consideration some … Education (E4) community-building workshop at the  2019 Association for Environmental Studies and Sciences …
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Introducing New Members of the JGI User Executive Committee
… been an active user of the JGI at any time in the past two fiscal years is eligible for election to the UEC. Members serve … in late 2022 and the election period concluded on Jan. 6, 2023. With the election, the following UEC members …
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JGI User Executive Committee Expands
… research and don’t award at least 70 research doctorates a year. Coinciding with the election results, Roland … been an active user of the JGI at any time in the past two fiscal years is eligible for election to the UEC. Members serve …
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Tanja Woyke
Editorial Board Member for ISME J (Senior Editor 2016-2021), Peer J (2015-2019), Scientific Data (2017-2019). Reviewer for major journals and funding agencies, …
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